Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-1P43699 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-1P43699 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-1P43699 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.82□□□□□ -0.04
NKX2-1P43699 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-1P43699 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-1P43699 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-1P43699 POM121L13P-201ENST00000422362 380 ntBASIC14.82□□□□□ -0.04
NKX2-1P43699 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
NKX2-1P43699 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-1P43699 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC14.82□□□□□ -0.04
NKX2-1P43699 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-1P43699 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-1P43699 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NKX2-1P43699 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.82□□□□□ -0.04
NKX2-1P43699 AC131212.4-201ENST00000623606 975 ntBASIC14.82□□□□□ -0.04
NKX2-1P43699 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.82□□□□□ -0.04
NKX2-1P43699 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-1P43699 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-1P43699 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-1P43699 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-1P43699 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-1P43699 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC14.82□□□□□ -0.04
NKX2-1P43699 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-1P43699 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
NKX2-1P43699 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-1P43699 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.82□□□□□ -0.04
NKX2-1P43699 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NKX2-1P43699 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.81□□□□□ -0.04
NKX2-1P43699 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-1P43699 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-1P43699 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-1P43699 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-1P43699 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-1P43699 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
NKX2-1P43699 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-1P43699 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NKX2-1P43699 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC14.81□□□□□ -0.04
NKX2-1P43699 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.81□□□□□ -0.04
NKX2-1P43699 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-1P43699 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.81□□□□□ -0.04
NKX2-1P43699 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC14.81□□□□□ -0.04
NKX2-1P43699 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.81□□□□□ -0.04
NKX2-1P43699 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-1P43699 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC14.81□□□□□ -0.04
NKX2-1P43699 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-1P43699 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-1P43699 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-1P43699 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-1P43699 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-1P43699 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-1P43699 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.81□□□□□ -0.04
NKX2-1P43699 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-1P43699 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.81□□□□□ -0.04
NKX2-1P43699 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-1P43699 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-1P43699 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
NKX2-1P43699 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-1P43699 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-1P43699 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-1P43699 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-1P43699 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-1P43699 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-1P43699 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NKX2-1P43699 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-1P43699 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-1P43699 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-1P43699 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.8□□□□□ -0.04
NKX2-1P43699 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.8□□□□□ -0.04
NKX2-1P43699 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NKX2-1P43699 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-1P43699 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-1P43699 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-1P43699 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
NKX2-1P43699 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NKX2-1P43699 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-1P43699 UNC93B4-201ENST00000505679 747 ntBASIC14.8□□□□□ -0.04
NKX2-1P43699 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14.8□□□□□ -0.04
NKX2-1P43699 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.8□□□□□ -0.04
NKX2-1P43699 AC104771.1-201ENST00000603335 964 ntBASIC14.8□□□□□ -0.04
NKX2-1P43699 AL445675.2-201ENST00000620291 557 ntBASIC14.8□□□□□ -0.04
NKX2-1P43699 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
NKX2-1P43699 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
NKX2-1P43699 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-1P43699 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-1P43699 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-1P43699 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-1P43699 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.8□□□□□ -0.04
NKX2-1P43699 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-1P43699 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC14.8□□□□□ -0.04
NKX2-1P43699 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-1P43699 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NKX2-1P43699 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-1P43699 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC14.8□□□□□ -0.04
NKX2-1P43699 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-1P43699 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.8□□□□□ -0.04
NKX2-1P43699 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-1P43699 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-1P43699 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NKX2-1P43699 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms