Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
KDM5CP41229 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
KDM5CP41229 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
KDM5CP41229 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC26.89■■□□□ 1.89
KDM5CP41229 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC26.89■■□□□ 1.89
KDM5CP41229 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
KDM5CP41229 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC26.89■■□□□ 1.89
KDM5CP41229 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC26.89■■□□□ 1.89
KDM5CP41229 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
KDM5CP41229 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
KDM5CP41229 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
KDM5CP41229 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
KDM5CP41229 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC26.88■■□□□ 1.89
KDM5CP41229 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
KDM5CP41229 COX5A-202ENST00000562233 441 ntTSL 3 BASIC26.88■■□□□ 1.89
KDM5CP41229 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC26.88■■□□□ 1.89
KDM5CP41229 AC011467.4-201ENST00000594891 528 ntBASIC26.88■■□□□ 1.89
KDM5CP41229 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
KDM5CP41229 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
KDM5CP41229 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC26.88■■□□□ 1.89
KDM5CP41229 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC26.88■■□□□ 1.89
KDM5CP41229 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC26.88■■□□□ 1.89
KDM5CP41229 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC26.88■■□□□ 1.89
KDM5CP41229 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
KDM5CP41229 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC26.88■■□□□ 1.89
KDM5CP41229 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
KDM5CP41229 NCF1C-201ENST00000438382 1427 ntBASIC26.87■■□□□ 1.89
KDM5CP41229 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC26.87■■□□□ 1.89
KDM5CP41229 AL353593.2-201ENST00000602529 1483 ntBASIC26.87■■□□□ 1.89
KDM5CP41229 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC26.87■■□□□ 1.89
KDM5CP41229 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
KDM5CP41229 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
KDM5CP41229 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC26.87■■□□□ 1.89
KDM5CP41229 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
KDM5CP41229 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
KDM5CP41229 CRYGEP-201ENST00000412192 528 ntBASIC26.87■■□□□ 1.89
KDM5CP41229 TSEN15P1-201ENST00000423257 515 ntBASIC26.87■■□□□ 1.89
KDM5CP41229 IGHV3-65-201ENST00000523210 341 ntBASIC26.87■■□□□ 1.89
KDM5CP41229 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC26.87■■□□□ 1.89
KDM5CP41229 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC26.87■■□□□ 1.89
KDM5CP41229 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC26.87■■□□□ 1.89
KDM5CP41229 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
KDM5CP41229 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
KDM5CP41229 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
KDM5CP41229 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
KDM5CP41229 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
KDM5CP41229 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC26.86■■□□□ 1.89
KDM5CP41229 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
KDM5CP41229 STOM-202ENST00000347359 870 ntTSL 2 BASIC26.86■■□□□ 1.89
KDM5CP41229 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC26.86■■□□□ 1.89
KDM5CP41229 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
KDM5CP41229 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC26.86■■□□□ 1.89
KDM5CP41229 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
KDM5CP41229 RNF34-208ENST00000555076 593 ntTSL 3 BASIC26.86■■□□□ 1.89
KDM5CP41229 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC26.86■■□□□ 1.89
KDM5CP41229 AC010654.1-201ENST00000615722 808 ntBASIC26.86■■□□□ 1.89
KDM5CP41229 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
KDM5CP41229 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
KDM5CP41229 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
KDM5CP41229 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
KDM5CP41229 GOLGA6L17P-202ENST00000614358 1398 ntBASIC26.86■■□□□ 1.89
KDM5CP41229 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
KDM5CP41229 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC26.86■■□□□ 1.89
KDM5CP41229 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC26.86■■□□□ 1.89
KDM5CP41229 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC26.85■■□□□ 1.89
KDM5CP41229 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC26.85■■□□□ 1.89
KDM5CP41229 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC26.85■■□□□ 1.89
KDM5CP41229 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
KDM5CP41229 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
KDM5CP41229 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC26.85■■□□□ 1.89
KDM5CP41229 AL805961.1-202ENST00000641562 540 ntBASIC26.85■■□□□ 1.89
KDM5CP41229 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
KDM5CP41229 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
KDM5CP41229 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
KDM5CP41229 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
KDM5CP41229 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
KDM5CP41229 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC26.85■■□□□ 1.89
KDM5CP41229 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
KDM5CP41229 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
KDM5CP41229 AL049812.1-201ENST00000432563 2267 ntBASIC26.84■■□□□ 1.89
KDM5CP41229 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC26.84■■□□□ 1.89
KDM5CP41229 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
KDM5CP41229 MIR770-201ENST00000390219 98 ntBASIC26.84■■□□□ 1.89
KDM5CP41229 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
KDM5CP41229 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC26.84■■□□□ 1.89
KDM5CP41229 AC106028.4-201ENST00000614509 607 ntBASIC26.84■■□□□ 1.89
KDM5CP41229 AC093028.1-201ENST00000622998 982 ntBASIC26.84■■□□□ 1.89
KDM5CP41229 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
KDM5CP41229 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
KDM5CP41229 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
KDM5CP41229 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
KDM5CP41229 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
KDM5CP41229 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
KDM5CP41229 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
KDM5CP41229 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC26.84■■□□□ 1.89
KDM5CP41229 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
KDM5CP41229 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
KDM5CP41229 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC26.84■■□□□ 1.89
KDM5CP41229 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
KDM5CP41229 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC26.84■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms