Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RFC4P35249 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RFC4P35249 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RFC4P35249 ALG1L5P-201ENST00000482043 771 ntBASIC22.61■■□□□ 1.21
RFC4P35249 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC22.61■■□□□ 1.21
RFC4P35249 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RFC4P35249 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC22.61■■□□□ 1.21
RFC4P35249 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RFC4P35249 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.61■■□□□ 1.21
RFC4P35249 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
RFC4P35249 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC22.6■■□□□ 1.21
RFC4P35249 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC22.6■■□□□ 1.21
RFC4P35249 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.6■■□□□ 1.21
RFC4P35249 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
RFC4P35249 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC22.6■■□□□ 1.21
RFC4P35249 SIGLEC16-201ENST00000599858 1437 ntBASIC22.6■■□□□ 1.21
RFC4P35249 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RFC4P35249 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RFC4P35249 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
RFC4P35249 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RFC4P35249 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC22.6■■□□□ 1.21
RFC4P35249 CRYGEP-201ENST00000412192 528 ntBASIC22.6■■□□□ 1.21
RFC4P35249 AC254562.1-201ENST00000417586 456 ntBASIC22.6■■□□□ 1.21
RFC4P35249 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
RFC4P35249 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RFC4P35249 AC122714.2-201ENST00000502787 707 ntBASIC22.6■■□□□ 1.21
RFC4P35249 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
RFC4P35249 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC22.6■■□□□ 1.21
RFC4P35249 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC22.6■■□□□ 1.21
RFC4P35249 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC22.6■■□□□ 1.21
RFC4P35249 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
RFC4P35249 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
RFC4P35249 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RFC4P35249 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RFC4P35249 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC22.59■■□□□ 1.21
RFC4P35249 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RFC4P35249 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RFC4P35249 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RFC4P35249 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RFC4P35249 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.59■■□□□ 1.21
RFC4P35249 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RFC4P35249 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
RFC4P35249 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RFC4P35249 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
RFC4P35249 SPDYE21P-201ENST00000413323 827 ntBASIC22.59■■□□□ 1.21
RFC4P35249 PON3-203ENST00000427422 894 ntTSL 3 BASIC22.59■■□□□ 1.21
RFC4P35249 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC22.59■■□□□ 1.21
RFC4P35249 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RFC4P35249 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC22.59■■□□□ 1.21
RFC4P35249 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC22.59■■□□□ 1.21
RFC4P35249 AC092865.6-201ENST00000642101 219 ntBASIC22.59■■□□□ 1.21
RFC4P35249 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RFC4P35249 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RFC4P35249 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
RFC4P35249 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC22.59■■□□□ 1.21
RFC4P35249 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC22.59■■□□□ 1.21
RFC4P35249 AC005082.1-201ENST00000413042 2259 ntBASIC22.59■■□□□ 1.21
RFC4P35249 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
RFC4P35249 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
RFC4P35249 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.21
RFC4P35249 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
RFC4P35249 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RFC4P35249 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RFC4P35249 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RFC4P35249 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RFC4P35249 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RFC4P35249 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RFC4P35249 AC096633.1-201ENST00000422446 749 ntBASIC22.58■■□□□ 1.21
RFC4P35249 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC22.58■■□□□ 1.21
RFC4P35249 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC22.58■■□□□ 1.21
RFC4P35249 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC22.58■■□□□ 1.21
RFC4P35249 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
RFC4P35249 AL589182.2-201ENST00000619332 1049 ntBASIC22.58■■□□□ 1.21
RFC4P35249 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RFC4P35249 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
RFC4P35249 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
RFC4P35249 AC010460.3-201ENST00000511359 1579 ntBASIC22.58■■□□□ 1.2
RFC4P35249 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC22.57■■□□□ 1.2
RFC4P35249 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC22.57■■□□□ 1.2
RFC4P35249 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFC4P35249 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFC4P35249 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFC4P35249 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFC4P35249 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
RFC4P35249 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC22.57■■□□□ 1.2
RFC4P35249 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC22.57■■□□□ 1.2
RFC4P35249 HTR5BP-201ENST00000430851 1154 ntBASIC22.57■■□□□ 1.2
RFC4P35249 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC22.57■■□□□ 1.2
RFC4P35249 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC22.57■■□□□ 1.2
RFC4P35249 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC22.57■■□□□ 1.2
RFC4P35249 C20orf181-201ENST00000623918 480 ntBASIC22.57■■□□□ 1.2
RFC4P35249 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFC4P35249 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFC4P35249 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFC4P35249 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
RFC4P35249 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFC4P35249 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC22.57■■□□□ 1.2
RFC4P35249 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
RFC4P35249 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RFC4P35249 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms