Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CIITAP33076 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CIITAP33076 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CIITAP33076 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.31■□□□□ 0.84
CIITAP33076 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.31■□□□□ 0.84
CIITAP33076 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CIITAP33076 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.31■□□□□ 0.84
CIITAP33076 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CIITAP33076 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.31■□□□□ 0.84
CIITAP33076 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CIITAP33076 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CIITAP33076 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CIITAP33076 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CIITAP33076 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CIITAP33076 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
CIITAP33076 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CIITAP33076 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.31■□□□□ 0.84
CIITAP33076 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.31■□□□□ 0.84
CIITAP33076 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CIITAP33076 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.31■□□□□ 0.84
CIITAP33076 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.31■□□□□ 0.84
CIITAP33076 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.31■□□□□ 0.84
CIITAP33076 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
CIITAP33076 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.31■□□□□ 0.84
CIITAP33076 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CIITAP33076 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CIITAP33076 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.31■□□□□ 0.84
CIITAP33076 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.31■□□□□ 0.84
CIITAP33076 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CIITAP33076 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.31■□□□□ 0.84
CIITAP33076 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CIITAP33076 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CIITAP33076 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CIITAP33076 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.3■□□□□ 0.84
CIITAP33076 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CIITAP33076 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.3■□□□□ 0.84
CIITAP33076 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CIITAP33076 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CIITAP33076 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CIITAP33076 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CIITAP33076 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CIITAP33076 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CIITAP33076 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.3■□□□□ 0.84
CIITAP33076 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CIITAP33076 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CIITAP33076 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.3■□□□□ 0.84
CIITAP33076 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CIITAP33076 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.3■□□□□ 0.84
CIITAP33076 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.3■□□□□ 0.84
CIITAP33076 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.3■□□□□ 0.84
CIITAP33076 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.3■□□□□ 0.84
CIITAP33076 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.3■□□□□ 0.84
CIITAP33076 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.3■□□□□ 0.84
CIITAP33076 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.3■□□□□ 0.84
CIITAP33076 BNIP3P18-201ENST00000593976 575 ntBASIC20.3■□□□□ 0.84
CIITAP33076 AC012313.10-201ENST00000623509 926 ntBASIC20.3■□□□□ 0.84
CIITAP33076 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CIITAP33076 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CIITAP33076 AP000997.3-201ENST00000623333 2250 ntBASIC20.3■□□□□ 0.84
CIITAP33076 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.3■□□□□ 0.84
CIITAP33076 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.3■□□□□ 0.84
CIITAP33076 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CIITAP33076 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CIITAP33076 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CIITAP33076 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.29■□□□□ 0.84
CIITAP33076 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CIITAP33076 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CIITAP33076 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.29■□□□□ 0.84
CIITAP33076 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CIITAP33076 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CIITAP33076 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CIITAP33076 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CIITAP33076 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CIITAP33076 POM121L3P-201ENST00000419331 1163 ntBASIC20.29■□□□□ 0.84
CIITAP33076 AC096633.1-201ENST00000422446 749 ntBASIC20.29■□□□□ 0.84
CIITAP33076 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.29■□□□□ 0.84
CIITAP33076 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.29■□□□□ 0.84
CIITAP33076 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.29■□□□□ 0.84
CIITAP33076 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.29■□□□□ 0.84
CIITAP33076 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.29■□□□□ 0.84
CIITAP33076 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.29■□□□□ 0.84
CIITAP33076 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CIITAP33076 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CIITAP33076 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CIITAP33076 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CIITAP33076 AC138028.4-201ENST00000564984 1845 ntBASIC20.29■□□□□ 0.84
CIITAP33076 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CIITAP33076 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CIITAP33076 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CIITAP33076 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CIITAP33076 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CIITAP33076 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CIITAP33076 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.28■□□□□ 0.84
CIITAP33076 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CIITAP33076 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.28■□□□□ 0.84
CIITAP33076 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CIITAP33076 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.28■□□□□ 0.84
CIITAP33076 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CIITAP33076 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CIITAP33076 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms