Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CHMP24386 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP24386 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP24386 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.91■□□□□ 0.3
CHMP24386 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CHMP24386 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP24386 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.91■□□□□ 0.3
CHMP24386 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP24386 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP24386 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP24386 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP24386 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CHMP24386 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CHMP24386 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.91■□□□□ 0.3
CHMP24386 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP24386 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP24386 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP24386 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP24386 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CHMP24386 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CHMP24386 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CHMP24386 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP24386 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP24386 MYLKP1-201ENST00000509077 1580 ntBASIC16.9■□□□□ 0.3
CHMP24386 AC036111.1-201ENST00000533973 1582 ntBASIC16.9■□□□□ 0.3
CHMP24386 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP24386 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP24386 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP24386 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP24386 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.9■□□□□ 0.3
CHMP24386 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP24386 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP24386 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.9■□□□□ 0.3
CHMP24386 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.9■□□□□ 0.3
CHMP24386 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.9■□□□□ 0.3
CHMP24386 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP24386 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.9■□□□□ 0.3
CHMP24386 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.9■□□□□ 0.3
CHMP24386 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP24386 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CHMP24386 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.9■□□□□ 0.3
CHMP24386 AC011558.1-201ENST00000623459 338 ntBASIC16.9■□□□□ 0.3
CHMP24386 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP24386 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP24386 AC012313.1-201ENST00000593393 3059 ntBASIC16.9■□□□□ 0.3
CHMP24386 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP24386 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CHMP24386 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CHMP24386 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CHMP24386 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.89■□□□□ 0.3
CHMP24386 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CHMP24386 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CHMP24386 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.89■□□□□ 0.29
CHMP24386 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CHMP24386 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP24386 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP24386 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CHMP24386 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP24386 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP24386 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP24386 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.89■□□□□ 0.29
CHMP24386 HOMER2P1-201ENST00000455653 964 ntBASIC16.89■□□□□ 0.29
CHMP24386 AC022616.7-201ENST00000525383 220 ntBASIC16.89■□□□□ 0.29
CHMP24386 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP24386 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CHMP24386 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CHMP24386 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CHMP24386 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP24386 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP24386 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP24386 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP24386 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CHMP24386 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CHMP24386 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP24386 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CHMP24386 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP24386 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.89■□□□□ 0.29
CHMP24386 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP24386 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP24386 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP24386 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CHMP24386 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
CHMP24386 KRT8P7-201ENST00000533003 1432 ntBASIC16.88■□□□□ 0.29
CHMP24386 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CHMP24386 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CHMP24386 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP24386 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CHMP24386 FLJ13224-201ENST00000313737 1514 ntBASIC16.88■□□□□ 0.29
CHMP24386 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP24386 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP24386 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP24386 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.88■□□□□ 0.29
CHMP24386 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP24386 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CHMP24386 FAM8A6P-201ENST00000407496 1135 ntBASIC16.88■□□□□ 0.29
CHMP24386 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.88■□□□□ 0.29
CHMP24386 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.88■□□□□ 0.29
CHMP24386 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.88■□□□□ 0.29
CHMP24386 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.88■□□□□ 0.29
CHMP24386 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms