Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN3P20807 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN3P20807 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN3P20807 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.41■□□□□ 0.38
CAPN3P20807 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN3P20807 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN3P20807 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN3P20807 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN3P20807 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN3P20807 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.4■□□□□ 0.38
CAPN3P20807 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN3P20807 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.4■□□□□ 0.38
CAPN3P20807 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN3P20807 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN3P20807 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN3P20807 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.4■□□□□ 0.38
CAPN3P20807 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN3P20807 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN3P20807 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN3P20807 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN3P20807 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN3P20807 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CAPN3P20807 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN3P20807 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.4■□□□□ 0.38
CAPN3P20807 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.4■□□□□ 0.38
CAPN3P20807 KRT18P57-201ENST00000443599 1254 ntBASIC17.4■□□□□ 0.38
CAPN3P20807 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.4■□□□□ 0.38
CAPN3P20807 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.4■□□□□ 0.38
CAPN3P20807 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CAPN3P20807 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN3P20807 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN3P20807 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN3P20807 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN3P20807 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CAPN3P20807 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.4■□□□□ 0.38
CAPN3P20807 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN3P20807 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.4■□□□□ 0.38
CAPN3P20807 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CAPN3P20807 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CAPN3P20807 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN3P20807 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN3P20807 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN3P20807 LINC01126-201ENST00000623515 1646 ntBASIC17.39■□□□□ 0.38
CAPN3P20807 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.39■□□□□ 0.38
CAPN3P20807 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CAPN3P20807 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN3P20807 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN3P20807 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN3P20807 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.39■□□□□ 0.37
CAPN3P20807 HTR7P1-202ENST00000624664 4411 ntBASIC17.39■□□□□ 0.37
CAPN3P20807 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN3P20807 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN3P20807 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN3P20807 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CAPN3P20807 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN3P20807 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN3P20807 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN3P20807 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CAPN3P20807 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN3P20807 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.39■□□□□ 0.37
CAPN3P20807 MFAP1P1-201ENST00000442257 1255 ntBASIC17.39■□□□□ 0.37
CAPN3P20807 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.39■□□□□ 0.37
CAPN3P20807 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CAPN3P20807 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN3P20807 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.39■□□□□ 0.37
CAPN3P20807 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.39■□□□□ 0.37
CAPN3P20807 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN3P20807 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.39■□□□□ 0.37
CAPN3P20807 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
CAPN3P20807 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.39■□□□□ 0.37
CAPN3P20807 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN3P20807 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN3P20807 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN3P20807 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN3P20807 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN3P20807 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN3P20807 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN3P20807 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CAPN3P20807 AC073508.3-201ENST00000619697 1419 ntBASIC17.38■□□□□ 0.37
CAPN3P20807 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN3P20807 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.38■□□□□ 0.37
CAPN3P20807 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN3P20807 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN3P20807 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN3P20807 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN3P20807 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN3P20807 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN3P20807 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.38■□□□□ 0.37
CAPN3P20807 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.38■□□□□ 0.37
CAPN3P20807 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN3P20807 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.38■□□□□ 0.37
CAPN3P20807 MIR1238-201ENST00000408483 83 ntBASIC17.38■□□□□ 0.37
CAPN3P20807 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.38■□□□□ 0.37
CAPN3P20807 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN3P20807 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.38■□□□□ 0.37
CAPN3P20807 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.38■□□□□ 0.37
CAPN3P20807 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.38■□□□□ 0.37
CAPN3P20807 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.38■□□□□ 0.37
CAPN3P20807 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CAPN3P20807 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms