Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 TSPY15P-201ENST00000457163 923 ntBASIC21.51■■□□□ 1.03
NCLP19338 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.51■■□□□ 1.03
NCLP19338 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NCLP19338 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.51■■□□□ 1.03
NCLP19338 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.51■■□□□ 1.03
NCLP19338 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.51■■□□□ 1.03
NCLP19338 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.51■■□□□ 1.03
NCLP19338 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NCLP19338 AL355075.4-201ENST00000554988 638 ntBASIC21.51■■□□□ 1.03
NCLP19338 AL445675.2-201ENST00000620291 557 ntBASIC21.51■■□□□ 1.03
NCLP19338 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCLP19338 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCLP19338 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.51■■□□□ 1.03
NCLP19338 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.51■■□□□ 1.03
NCLP19338 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC21.51■■□□□ 1.03
NCLP19338 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
NCLP19338 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCLP19338 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCLP19338 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.51■■□□□ 1.03
NCLP19338 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCLP19338 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.5■■□□□ 1.03
NCLP19338 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCLP19338 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCLP19338 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NCLP19338 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
NCLP19338 AC093677.2-201ENST00000600169 1863 ntBASIC21.5■■□□□ 1.03
NCLP19338 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.5■■□□□ 1.03
NCLP19338 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCLP19338 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC21.5■■□□□ 1.03
NCLP19338 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCLP19338 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.5■■□□□ 1.03
NCLP19338 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.5■■□□□ 1.03
NCLP19338 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.5■■□□□ 1.03
NCLP19338 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCLP19338 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.5■■□□□ 1.03
NCLP19338 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.5■■□□□ 1.03
NCLP19338 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.5■■□□□ 1.03
NCLP19338 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.5■■□□□ 1.03
NCLP19338 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
NCLP19338 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
NCLP19338 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.5■■□□□ 1.03
NCLP19338 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCLP19338 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCLP19338 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCLP19338 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
NCLP19338 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCLP19338 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NCLP19338 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCLP19338 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NCLP19338 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC21.5■■□□□ 1.03
NCLP19338 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.5■■□□□ 1.03
NCLP19338 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
NCLP19338 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.5■■□□□ 1.03
NCLP19338 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCLP19338 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCLP19338 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCLP19338 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NCLP19338 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
NCLP19338 RCC2P3-201ENST00000418112 1537 ntBASIC21.5■■□□□ 1.03
NCLP19338 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCLP19338 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
NCLP19338 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
NCLP19338 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
NCLP19338 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
NCLP19338 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
NCLP19338 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCLP19338 AC012317.2-201ENST00000623305 2251 ntBASIC21.49■■□□□ 1.03
NCLP19338 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCLP19338 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCLP19338 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCLP19338 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCLP19338 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCLP19338 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCLP19338 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
NCLP19338 AC211429.1-201ENST00000415277 523 ntBASIC21.49■■□□□ 1.03
NCLP19338 FAM197Y1-201ENST00000421178 764 ntBASIC21.49■■□□□ 1.03
NCLP19338 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
NCLP19338 AC004980.1-204ENST00000429707 299 ntBASIC21.49■■□□□ 1.03
NCLP19338 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCLP19338 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCLP19338 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
NCLP19338 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.49■■□□□ 1.03
NCLP19338 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.49■■□□□ 1.03
NCLP19338 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCLP19338 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCLP19338 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCLP19338 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
NCLP19338 AL139384.1-201ENST00000612143 3047 ntBASIC21.49■■□□□ 1.03
NCLP19338 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NCLP19338 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCLP19338 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NCLP19338 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCLP19338 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
NCLP19338 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NCLP19338 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.48■■□□□ 1.03
NCLP19338 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NCLP19338 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NCLP19338 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
NCLP19338 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NCLP19338 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms