Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.97■□□□□ 0.63
PDGFRAP16234 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFRAP16234 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFRAP16234 KRT18P48-201ENST00000434763 852 ntBASIC18.97■□□□□ 0.63
PDGFRAP16234 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.97■□□□□ 0.63
PDGFRAP16234 AC113404.2-201ENST00000507884 177 ntBASIC18.97■□□□□ 0.63
PDGFRAP16234 FAM86EP-206ENST00000510506 987 ntBASIC18.97■□□□□ 0.63
PDGFRAP16234 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.97■□□□□ 0.63
PDGFRAP16234 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.97■□□□□ 0.63
PDGFRAP16234 ZNF444P1-201ENST00000559497 298 ntBASIC18.97■□□□□ 0.63
PDGFRAP16234 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFRAP16234 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFRAP16234 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PDGFRAP16234 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
PDGFRAP16234 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PDGFRAP16234 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.97■□□□□ 0.63
PDGFRAP16234 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PDGFRAP16234 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFRAP16234 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PDGFRAP16234 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFRAP16234 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFRAP16234 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFRAP16234 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFRAP16234 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.97■□□□□ 0.63
PDGFRAP16234 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFRAP16234 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PDGFRAP16234 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFRAP16234 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFRAP16234 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFRAP16234 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFRAP16234 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PDGFRAP16234 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFRAP16234 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFRAP16234 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFRAP16234 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.96■□□□□ 0.63
PDGFRAP16234 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFRAP16234 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFRAP16234 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFRAP16234 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFRAP16234 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.96■□□□□ 0.63
PDGFRAP16234 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.96■□□□□ 0.63
PDGFRAP16234 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.96■□□□□ 0.63
PDGFRAP16234 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFRAP16234 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.96■□□□□ 0.63
PDGFRAP16234 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.96■□□□□ 0.63
PDGFRAP16234 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.96■□□□□ 0.63
PDGFRAP16234 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.96■□□□□ 0.63
PDGFRAP16234 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.96■□□□□ 0.63
PDGFRAP16234 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PDGFRAP16234 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFRAP16234 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFRAP16234 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFRAP16234 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFRAP16234 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFRAP16234 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFRAP16234 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFRAP16234 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PDGFRAP16234 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFRAP16234 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PDGFRAP16234 NOC2LP2-201ENST00000407594 1944 ntBASIC18.96■□□□□ 0.63
PDGFRAP16234 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFRAP16234 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFRAP16234 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFRAP16234 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.95■□□□□ 0.62
PDGFRAP16234 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PDGFRAP16234 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFRAP16234 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PDGFRAP16234 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFRAP16234 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFRAP16234 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFRAP16234 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PDGFRAP16234 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PDGFRAP16234 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
PDGFRAP16234 LINC00167-201ENST00000530583 1419 ntBASIC18.95■□□□□ 0.62
PDGFRAP16234 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PDGFRAP16234 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFRAP16234 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFRAP16234 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PDGFRAP16234 PCED1CP-201ENST00000419887 785 ntBASIC18.95■□□□□ 0.62
PDGFRAP16234 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFRAP16234 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PDGFRAP16234 VENTXP5-201ENST00000523979 775 ntBASIC18.95■□□□□ 0.62
PDGFRAP16234 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.95■□□□□ 0.62
PDGFRAP16234 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.95■□□□□ 0.62
PDGFRAP16234 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PDGFRAP16234 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFRAP16234 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFRAP16234 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
PDGFRAP16234 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.95■□□□□ 0.62
PDGFRAP16234 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PDGFRAP16234 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PDGFRAP16234 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDGFRAP16234 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDGFRAP16234 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
PDGFRAP16234 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDGFRAP16234 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.94■□□□□ 0.62
PDGFRAP16234 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDGFRAP16234 AC008764.6-201ENST00000595909 2069 ntBASIC18.94■□□□□ 0.62
PDGFRAP16234 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.94■□□□□ 0.62
PDGFRAP16234 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms