Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.74■□□□□ 0.27
UBL4AP11441 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
UBL4AP11441 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.74■□□□□ 0.27
UBL4AP11441 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.74■□□□□ 0.27
UBL4AP11441 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.74■□□□□ 0.27
UBL4AP11441 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
UBL4AP11441 AC139887.4-201ENST00000607877 719 ntBASIC16.74■□□□□ 0.27
UBL4AP11441 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
UBL4AP11441 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBL4AP11441 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBL4AP11441 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBL4AP11441 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBL4AP11441 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBL4AP11441 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.74■□□□□ 0.27
UBL4AP11441 PHGDH-209ENST00000641074 1780 ntBASIC16.74■□□□□ 0.27
UBL4AP11441 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBL4AP11441 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
UBL4AP11441 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBL4AP11441 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.73■□□□□ 0.27
UBL4AP11441 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBL4AP11441 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBL4AP11441 AL024508.2-201ENST00000607749 1894 ntBASIC16.73■□□□□ 0.27
UBL4AP11441 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBL4AP11441 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.73■□□□□ 0.27
UBL4AP11441 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBL4AP11441 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBL4AP11441 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.73■□□□□ 0.27
UBL4AP11441 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
UBL4AP11441 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBL4AP11441 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBL4AP11441 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBL4AP11441 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBL4AP11441 YBX1P2-201ENST00000489612 999 ntBASIC16.73■□□□□ 0.27
UBL4AP11441 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
UBL4AP11441 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
UBL4AP11441 AL441883.1-201ENST00000566170 1045 ntBASIC16.73■□□□□ 0.27
UBL4AP11441 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
UBL4AP11441 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBL4AP11441 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
UBL4AP11441 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBL4AP11441 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBL4AP11441 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
UBL4AP11441 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.73■□□□□ 0.27
UBL4AP11441 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.73■□□□□ 0.27
UBL4AP11441 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBL4AP11441 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.72■□□□□ 0.27
UBL4AP11441 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
UBL4AP11441 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
UBL4AP11441 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBL4AP11441 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBL4AP11441 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
UBL4AP11441 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.72■□□□□ 0.27
UBL4AP11441 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBL4AP11441 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBL4AP11441 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBL4AP11441 REXO1L9P-201ENST00000604264 2108 ntBASIC16.72■□□□□ 0.27
UBL4AP11441 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBL4AP11441 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBL4AP11441 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.72■□□□□ 0.27
UBL4AP11441 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBL4AP11441 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBL4AP11441 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
UBL4AP11441 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBL4AP11441 LINC01126-201ENST00000623515 1646 ntBASIC16.72■□□□□ 0.27
UBL4AP11441 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
UBL4AP11441 AC117947.1-201ENST00000427448 529 ntBASIC16.72■□□□□ 0.27
UBL4AP11441 PVRIG2P-201ENST00000435460 978 ntBASIC16.72■□□□□ 0.27
UBL4AP11441 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.72■□□□□ 0.27
UBL4AP11441 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.72■□□□□ 0.27
UBL4AP11441 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBL4AP11441 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.72■□□□□ 0.27
UBL4AP11441 AC011558.1-201ENST00000623459 338 ntBASIC16.72■□□□□ 0.27
UBL4AP11441 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.72■□□□□ 0.27
UBL4AP11441 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBL4AP11441 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.72■□□□□ 0.27
UBL4AP11441 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBL4AP11441 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBL4AP11441 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
UBL4AP11441 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBL4AP11441 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.72■□□□□ 0.27
UBL4AP11441 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBL4AP11441 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
UBL4AP11441 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
UBL4AP11441 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBL4AP11441 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBL4AP11441 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
UBL4AP11441 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBL4AP11441 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBL4AP11441 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.72■□□□□ 0.27
UBL4AP11441 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBL4AP11441 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBL4AP11441 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBL4AP11441 AL096828.2-201ENST00000567259 1965 ntBASIC16.71■□□□□ 0.27
UBL4AP11441 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBL4AP11441 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.71■□□□□ 0.27
UBL4AP11441 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBL4AP11441 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBL4AP11441 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBL4AP11441 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBL4AP11441 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms