Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM17P0DL12 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SMIM17P0DL12 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM17P0DL12 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC13.49□□□□□ -0.25
SMIM17P0DL12 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC13.49□□□□□ -0.25
SMIM17P0DL12 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM17P0DL12 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM17P0DL12 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC13.49□□□□□ -0.25
SMIM17P0DL12 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC13.49□□□□□ -0.25
SMIM17P0DL12 TK2-208ENST00000545043 1120 ntTSL 2 BASIC13.49□□□□□ -0.25
SMIM17P0DL12 WT1-AS_3.1-201ENST00000613262 234 ntBASIC13.49□□□□□ -0.25
SMIM17P0DL12 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM17P0DL12 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM17P0DL12 MYC-209ENST00000641252 345 ntBASIC13.49□□□□□ -0.25
SMIM17P0DL12 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM17P0DL12 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM17P0DL12 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM17P0DL12 PCDHA12-202ENST00000613593 2588 ntBASIC13.49□□□□□ -0.25
SMIM17P0DL12 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM17P0DL12 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM17P0DL12 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM17P0DL12 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SMIM17P0DL12 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM17P0DL12 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SMIM17P0DL12 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM17P0DL12 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC13.48□□□□□ -0.25
SMIM17P0DL12 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC13.48□□□□□ -0.25
SMIM17P0DL12 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM17P0DL12 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM17P0DL12 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM17P0DL12 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SMIM17P0DL12 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.48□□□□□ -0.25
SMIM17P0DL12 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM17P0DL12 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC13.48□□□□□ -0.25
SMIM17P0DL12 AC135776.1-201ENST00000319817 2481 ntBASIC13.48□□□□□ -0.25
SMIM17P0DL12 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM17P0DL12 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM17P0DL12 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM17P0DL12 NFYC-AS1-201ENST00000606277 1687 ntBASIC13.48□□□□□ -0.25
SMIM17P0DL12 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM17P0DL12 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SMIM17P0DL12 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM17P0DL12 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM17P0DL12 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
SMIM17P0DL12 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM17P0DL12 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC13.48□□□□□ -0.25
SMIM17P0DL12 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC13.48□□□□□ -0.25
SMIM17P0DL12 POM121L13P-201ENST00000422362 380 ntBASIC13.48□□□□□ -0.25
SMIM17P0DL12 TSPY6P-201ENST00000448518 926 ntBASIC13.48□□□□□ -0.25
SMIM17P0DL12 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.48□□□□□ -0.25
SMIM17P0DL12 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.48□□□□□ -0.25
SMIM17P0DL12 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM17P0DL12 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.48□□□□□ -0.25
SMIM17P0DL12 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC13.48□□□□□ -0.25
SMIM17P0DL12 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.48□□□□□ -0.25
SMIM17P0DL12 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC13.48□□□□□ -0.25
SMIM17P0DL12 AC068587.9-201ENST00000641814 219 ntBASIC13.48□□□□□ -0.25
SMIM17P0DL12 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM17P0DL12 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM17P0DL12 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC13.48□□□□□ -0.25
SMIM17P0DL12 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM17P0DL12 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM17P0DL12 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SMIM17P0DL12 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
SMIM17P0DL12 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM17P0DL12 MTMR9LP-203ENST00000426597 1545 ntBASIC13.48□□□□□ -0.25
SMIM17P0DL12 AL499627.1-201ENST00000569373 2188 ntBASIC13.48□□□□□ -0.25
SMIM17P0DL12 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SMIM17P0DL12 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SMIM17P0DL12 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC13.48□□□□□ -0.25
SMIM17P0DL12 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.48□□□□□ -0.25
SMIM17P0DL12 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
SMIM17P0DL12 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM17P0DL12 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC13.47□□□□□ -0.25
SMIM17P0DL12 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM17P0DL12 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SMIM17P0DL12 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM17P0DL12 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM17P0DL12 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM17P0DL12 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM17P0DL12 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.47□□□□□ -0.25
SMIM17P0DL12 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM17P0DL12 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC13.47□□□□□ -0.25
SMIM17P0DL12 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM17P0DL12 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM17P0DL12 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC13.47□□□□□ -0.25
SMIM17P0DL12 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC13.47□□□□□ -0.25
SMIM17P0DL12 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM17P0DL12 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM17P0DL12 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC13.47□□□□□ -0.25
SMIM17P0DL12 THEM4-205ENST00000489410 643 ntTSL 2 BASIC13.47□□□□□ -0.25
SMIM17P0DL12 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM17P0DL12 DLX3-202ENST00000512495 834 ntTSL 2 BASIC13.47□□□□□ -0.25
SMIM17P0DL12 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.47□□□□□ -0.25
SMIM17P0DL12 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.47□□□□□ -0.25
SMIM17P0DL12 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC13.47□□□□□ -0.25
SMIM17P0DL12 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC13.47□□□□□ -0.25
SMIM17P0DL12 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM17P0DL12 IKBKGP1-201ENST00000612193 1073 ntBASIC13.47□□□□□ -0.25
SMIM17P0DL12 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms