Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
TPM1P09493 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TPM1P09493 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM1P09493 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM1P09493 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TPM1P09493 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TPM1P09493 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM1P09493 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TPM1P09493 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TPM1P09493 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM1P09493 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TPM1P09493 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.92■□□□□ 0.78
TPM1P09493 FSCN1P1-201ENST00000568912 1481 ntBASIC19.92■□□□□ 0.78
TPM1P09493 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TPM1P09493 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TPM1P09493 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.92■□□□□ 0.78
TPM1P09493 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.92■□□□□ 0.78
TPM1P09493 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM1P09493 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.92■□□□□ 0.78
TPM1P09493 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC19.92■□□□□ 0.78
TPM1P09493 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM1P09493 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM1P09493 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.92■□□□□ 0.78
TPM1P09493 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.92■□□□□ 0.78
TPM1P09493 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TPM1P09493 GPAT2P1-201ENST00000444924 1672 ntBASIC19.92■□□□□ 0.78
TPM1P09493 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM1P09493 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.92■□□□□ 0.78
TPM1P09493 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM1P09493 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.92■□□□□ 0.78
TPM1P09493 MIR149-201ENST00000384879 89 ntBASIC19.92■□□□□ 0.78
TPM1P09493 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TPM1P09493 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.92■□□□□ 0.78
TPM1P09493 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.92■□□□□ 0.78
TPM1P09493 AC011506.1-201ENST00000474329 610 ntBASIC19.92■□□□□ 0.78
TPM1P09493 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.92■□□□□ 0.78
TPM1P09493 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.92■□□□□ 0.78
TPM1P09493 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
TPM1P09493 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TPM1P09493 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM1P09493 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM1P09493 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.92■□□□□ 0.78
TPM1P09493 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TPM1P09493 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.92■□□□□ 0.78
TPM1P09493 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM1P09493 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.92■□□□□ 0.78
TPM1P09493 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.92■□□□□ 0.78
TPM1P09493 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM1P09493 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.92■□□□□ 0.78
TPM1P09493 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TPM1P09493 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TPM1P09493 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.91■□□□□ 0.78
TPM1P09493 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM1P09493 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM1P09493 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM1P09493 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
TPM1P09493 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM1P09493 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.91■□□□□ 0.78
TPM1P09493 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.91■□□□□ 0.78
TPM1P09493 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.91■□□□□ 0.78
TPM1P09493 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.91■□□□□ 0.78
TPM1P09493 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.91■□□□□ 0.78
TPM1P09493 AP000692.2-201ENST00000608391 879 ntBASIC19.91■□□□□ 0.78
TPM1P09493 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.91■□□□□ 0.78
TPM1P09493 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.91■□□□□ 0.78
TPM1P09493 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.91■□□□□ 0.78
TPM1P09493 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TPM1P09493 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TPM1P09493 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TPM1P09493 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM1P09493 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM1P09493 AL163051.1-201ENST00000569214 1512 ntBASIC19.91■□□□□ 0.78
TPM1P09493 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM1P09493 AC006116.8-202ENST00000587620 1550 ntBASIC19.91■□□□□ 0.78
TPM1P09493 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TPM1P09493 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM1P09493 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TPM1P09493 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TPM1P09493 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TPM1P09493 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM1P09493 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM1P09493 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.9■□□□□ 0.78
TPM1P09493 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM1P09493 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.9■□□□□ 0.78
TPM1P09493 AD000864.1-201ENST00000624076 2295 ntBASIC19.9■□□□□ 0.78
TPM1P09493 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM1P09493 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.9■□□□□ 0.78
TPM1P09493 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM1P09493 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM1P09493 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TPM1P09493 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TPM1P09493 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM1P09493 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM1P09493 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.9■□□□□ 0.78
TPM1P09493 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM1P09493 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TPM1P09493 AF186192.3-201ENST00000583427 947 ntBASIC19.9■□□□□ 0.78
TPM1P09493 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.9■□□□□ 0.78
TPM1P09493 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TPM1P09493 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms