Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
APOA4P06727 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.14■□□□□ 0.49
APOA4P06727 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.14■□□□□ 0.49
APOA4P06727 BX664615.1-201ENST00000443558 458 ntBASIC18.14■□□□□ 0.49
APOA4P06727 COX11P1-201ENST00000489116 835 ntBASIC18.14■□□□□ 0.49
APOA4P06727 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
APOA4P06727 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.14■□□□□ 0.49
APOA4P06727 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.14■□□□□ 0.49
APOA4P06727 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
APOA4P06727 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.14■□□□□ 0.49
APOA4P06727 AC092865.7-201ENST00000641832 219 ntBASIC18.14■□□□□ 0.49
APOA4P06727 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APOA4P06727 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.14■□□□□ 0.49
APOA4P06727 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
APOA4P06727 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
APOA4P06727 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APOA4P06727 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.14■□□□□ 0.49
APOA4P06727 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APOA4P06727 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.14■□□□□ 0.49
APOA4P06727 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.14■□□□□ 0.49
APOA4P06727 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
APOA4P06727 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
APOA4P06727 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
APOA4P06727 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.13■□□□□ 0.49
APOA4P06727 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
APOA4P06727 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
APOA4P06727 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
APOA4P06727 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
APOA4P06727 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.13■□□□□ 0.49
APOA4P06727 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
APOA4P06727 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.13■□□□□ 0.49
APOA4P06727 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.13■□□□□ 0.49
APOA4P06727 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.13■□□□□ 0.49
APOA4P06727 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
APOA4P06727 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
APOA4P06727 SEC1P-202ENST00000473944 940 ntBASIC18.13■□□□□ 0.49
APOA4P06727 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.13■□□□□ 0.49
APOA4P06727 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.13■□□□□ 0.49
APOA4P06727 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.13■□□□□ 0.49
APOA4P06727 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
APOA4P06727 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.13■□□□□ 0.49
APOA4P06727 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.13■□□□□ 0.49
APOA4P06727 AC010240.3-201ENST00000607688 395 ntBASIC18.13■□□□□ 0.49
APOA4P06727 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.13■□□□□ 0.49
APOA4P06727 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
APOA4P06727 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
APOA4P06727 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
APOA4P06727 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
APOA4P06727 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
APOA4P06727 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.13■□□□□ 0.49
APOA4P06727 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
APOA4P06727 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
APOA4P06727 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.12■□□□□ 0.49
APOA4P06727 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
APOA4P06727 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
APOA4P06727 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.12■□□□□ 0.49
APOA4P06727 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.12■□□□□ 0.49
APOA4P06727 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.12■□□□□ 0.49
APOA4P06727 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
APOA4P06727 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
APOA4P06727 AC073508.3-201ENST00000619697 1419 ntBASIC18.12■□□□□ 0.49
APOA4P06727 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.12■□□□□ 0.49
APOA4P06727 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
APOA4P06727 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.12■□□□□ 0.49
APOA4P06727 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
APOA4P06727 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
APOA4P06727 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.12■□□□□ 0.49
APOA4P06727 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
APOA4P06727 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
APOA4P06727 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.12■□□□□ 0.49
APOA4P06727 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
APOA4P06727 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
APOA4P06727 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.12■□□□□ 0.49
APOA4P06727 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
APOA4P06727 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
APOA4P06727 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
APOA4P06727 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.11■□□□□ 0.49
APOA4P06727 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
APOA4P06727 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
APOA4P06727 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
APOA4P06727 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
APOA4P06727 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
APOA4P06727 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.11■□□□□ 0.49
APOA4P06727 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
APOA4P06727 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
APOA4P06727 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
APOA4P06727 MIR149-201ENST00000384879 89 ntBASIC18.11■□□□□ 0.49
APOA4P06727 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.11■□□□□ 0.49
APOA4P06727 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.11■□□□□ 0.49
APOA4P06727 KRT18P57-201ENST00000443599 1254 ntBASIC18.11■□□□□ 0.49
APOA4P06727 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.11■□□□□ 0.49
APOA4P06727 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
APOA4P06727 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.11■□□□□ 0.49
APOA4P06727 AL023973.1-201ENST00000624619 620 ntBASIC18.11■□□□□ 0.49
APOA4P06727 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.11■□□□□ 0.49
APOA4P06727 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.11■□□□□ 0.49
APOA4P06727 AC009102.3-201ENST00000623118 1491 ntBASIC18.11■□□□□ 0.49
APOA4P06727 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
APOA4P06727 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
APOA4P06727 SIRPAP1-201ENST00000448467 1770 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms