Protein–RNA interactions for Protein: P04179

SOD2, Superoxide dismutase [Mn], mitochondrial, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2P04179 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
SOD2P04179 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOD2P04179 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SOD2P04179 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOD2P04179 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOD2P04179 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOD2P04179 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOD2P04179 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SOD2P04179 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SOD2P04179 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOD2P04179 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SOD2P04179 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.97■□□□□ 0.63
SOD2P04179 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOD2P04179 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOD2P04179 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SOD2P04179 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.97■□□□□ 0.63
SOD2P04179 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.96■□□□□ 0.63
SOD2P04179 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SOD2P04179 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SOD2P04179 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
SOD2P04179 PHGDH-209ENST00000641074 1780 ntBASIC18.96■□□□□ 0.63
SOD2P04179 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SOD2P04179 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.96■□□□□ 0.63
SOD2P04179 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SOD2P04179 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.96■□□□□ 0.63
SOD2P04179 MIR1233-2-201ENST00000408138 82 ntBASIC18.96■□□□□ 0.63
SOD2P04179 MIR1233-1-201ENST00000408722 82 ntBASIC18.96■□□□□ 0.63
SOD2P04179 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SOD2P04179 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.96■□□□□ 0.63
SOD2P04179 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SOD2P04179 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
SOD2P04179 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.96■□□□□ 0.63
SOD2P04179 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.96■□□□□ 0.63
SOD2P04179 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.96■□□□□ 0.63
SOD2P04179 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.96■□□□□ 0.63
SOD2P04179 AC140113.2-201ENST00000604370 208 ntBASIC18.96■□□□□ 0.63
SOD2P04179 AD001527.2-201ENST00000622994 785 ntBASIC18.96■□□□□ 0.63
SOD2P04179 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.96■□□□□ 0.63
SOD2P04179 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SOD2P04179 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SOD2P04179 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.96■□□□□ 0.63
SOD2P04179 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SOD2P04179 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SOD2P04179 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SOD2P04179 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SOD2P04179 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
SOD2P04179 KRT8P47-201ENST00000604727 1398 ntBASIC18.95■□□□□ 0.62
SOD2P04179 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SOD2P04179 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SOD2P04179 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.95■□□□□ 0.62
SOD2P04179 MED15P5-201ENST00000423150 992 ntBASIC18.95■□□□□ 0.62
SOD2P04179 AL591424.1-201ENST00000442569 1213 ntBASIC18.95■□□□□ 0.62
SOD2P04179 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.95■□□□□ 0.62
SOD2P04179 AC073592.4-201ENST00000623827 446 ntBASIC18.95■□□□□ 0.62
SOD2P04179 AL022326.1-202ENST00000641533 845 ntBASIC18.95■□□□□ 0.62
SOD2P04179 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SOD2P04179 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.95■□□□□ 0.62
SOD2P04179 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.95■□□□□ 0.62
SOD2P04179 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SOD2P04179 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SOD2P04179 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SOD2P04179 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SOD2P04179 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
SOD2P04179 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SOD2P04179 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SOD2P04179 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SOD2P04179 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SOD2P04179 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SOD2P04179 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SOD2P04179 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.94■□□□□ 0.62
SOD2P04179 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.94■□□□□ 0.62
SOD2P04179 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.94■□□□□ 0.62
SOD2P04179 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.94■□□□□ 0.62
SOD2P04179 BX005266.1-201ENST00000473402 457 ntBASIC18.94■□□□□ 0.62
SOD2P04179 DUTP2-201ENST00000519164 463 ntBASIC18.94■□□□□ 0.62
SOD2P04179 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.94■□□□□ 0.62
SOD2P04179 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SOD2P04179 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
SOD2P04179 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SOD2P04179 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.94■□□□□ 0.62
SOD2P04179 AC022898.2-201ENST00000616822 1312 ntBASIC18.94■□□□□ 0.62
SOD2P04179 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SOD2P04179 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SOD2P04179 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SOD2P04179 AC073592.3-201ENST00000625118 1834 ntBASIC18.93■□□□□ 0.62
SOD2P04179 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.93■□□□□ 0.62
SOD2P04179 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SOD2P04179 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SOD2P04179 AP002414.3-201ENST00000589352 1468 ntBASIC18.93■□□□□ 0.62
SOD2P04179 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.93■□□□□ 0.62
SOD2P04179 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SOD2P04179 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SOD2P04179 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SOD2P04179 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SOD2P04179 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SOD2P04179 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.93■□□□□ 0.62
SOD2P04179 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.93■□□□□ 0.62
SOD2P04179 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SOD2P04179 AL356488.2-201ENST00000602755 427 ntBASIC18.93■□□□□ 0.62
SOD2P04179 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms