Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.75■□□□□ 0.75
VTNP04004 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.75■□□□□ 0.75
VTNP04004 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.75■□□□□ 0.75
VTNP04004 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.75■□□□□ 0.75
VTNP04004 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.75■□□□□ 0.75
VTNP04004 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.75■□□□□ 0.75
VTNP04004 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.75■□□□□ 0.75
VTNP04004 AC148477.8-201ENST00000624298 468 ntBASIC19.75■□□□□ 0.75
VTNP04004 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VTNP04004 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
VTNP04004 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
VTNP04004 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.75■□□□□ 0.75
VTNP04004 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VTNP04004 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.75■□□□□ 0.75
VTNP04004 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
VTNP04004 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VTNP04004 TNXA-203ENST00000507684 2038 ntBASIC19.75■□□□□ 0.75
VTNP04004 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.75■□□□□ 0.75
VTNP04004 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
VTNP04004 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VTNP04004 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.74■□□□□ 0.75
VTNP04004 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.74■□□□□ 0.75
VTNP04004 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VTNP04004 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VTNP04004 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VTNP04004 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.74■□□□□ 0.75
VTNP04004 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VTNP04004 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
VTNP04004 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VTNP04004 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VTNP04004 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
VTNP04004 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
VTNP04004 MTDHP3-201ENST00000594186 672 ntBASIC19.74■□□□□ 0.75
VTNP04004 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.74■□□□□ 0.75
VTNP04004 AL355877.3-201ENST00000622820 899 ntBASIC19.74■□□□□ 0.75
VTNP04004 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VTNP04004 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
VTNP04004 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VTNP04004 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VTNP04004 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
VTNP04004 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VTNP04004 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTNP04004 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTNP04004 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTNP04004 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTNP04004 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.73■□□□□ 0.75
VTNP04004 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTNP04004 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VTNP04004 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
VTNP04004 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTNP04004 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTNP04004 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTNP04004 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
VTNP04004 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
VTNP04004 AL022342.1-201ENST00000400363 863 ntBASIC19.73■□□□□ 0.75
VTNP04004 FGFR3P6-201ENST00000457012 610 ntBASIC19.73■□□□□ 0.75
VTNP04004 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.73■□□□□ 0.75
VTNP04004 RNA5SP419-201ENST00000515908 135 ntBASIC19.73■□□□□ 0.75
VTNP04004 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.73■□□□□ 0.75
VTNP04004 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.73■□□□□ 0.75
VTNP04004 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.73■□□□□ 0.75
VTNP04004 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.73■□□□□ 0.75
VTNP04004 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.73■□□□□ 0.75
VTNP04004 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.73■□□□□ 0.75
VTNP04004 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.73■□□□□ 0.75
VTNP04004 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTNP04004 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.73■□□□□ 0.75
VTNP04004 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTNP04004 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTNP04004 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTNP04004 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTNP04004 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
VTNP04004 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.73■□□□□ 0.75
VTNP04004 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
VTNP04004 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTNP04004 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.72■□□□□ 0.75
VTNP04004 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VTNP04004 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTNP04004 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTNP04004 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VTNP04004 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTNP04004 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTNP04004 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTNP04004 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTNP04004 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
VTNP04004 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.72■□□□□ 0.75
VTNP04004 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTNP04004 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.72■□□□□ 0.75
VTNP04004 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.72■□□□□ 0.75
VTNP04004 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
VTNP04004 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.72■□□□□ 0.75
VTNP04004 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
VTNP04004 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.72■□□□□ 0.75
VTNP04004 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
VTNP04004 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
VTNP04004 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTNP04004 BX323043.1-201ENST00000641006 1765 ntBASIC19.72■□□□□ 0.75
VTNP04004 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VTNP04004 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VTNP04004 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms