Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MT-ND1P03886 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MT-ND1P03886 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
MT-ND1P03886 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.08■□□□□ 0.32
MT-ND1P03886 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.08■□□□□ 0.32
MT-ND1P03886 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
MT-ND1P03886 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.08■□□□□ 0.32
MT-ND1P03886 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.08■□□□□ 0.32
MT-ND1P03886 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.08■□□□□ 0.32
MT-ND1P03886 RARRES2P10-201ENST00000564312 460 ntBASIC17.08■□□□□ 0.32
MT-ND1P03886 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MT-ND1P03886 CR392000.1-201ENST00000624770 1228 ntBASIC17.08■□□□□ 0.32
MT-ND1P03886 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.08■□□□□ 0.32
MT-ND1P03886 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.08■□□□□ 0.32
MT-ND1P03886 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MT-ND1P03886 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
MT-ND1P03886 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND1P03886 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND1P03886 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND1P03886 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND1P03886 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.07■□□□□ 0.32
MT-ND1P03886 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
MT-ND1P03886 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND1P03886 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND1P03886 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND1P03886 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
MT-ND1P03886 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND1P03886 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND1P03886 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND1P03886 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.07■□□□□ 0.32
MT-ND1P03886 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND1P03886 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
MT-ND1P03886 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND1P03886 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.07■□□□□ 0.32
MT-ND1P03886 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.07■□□□□ 0.32
MT-ND1P03886 AF186192.3-201ENST00000583427 947 ntBASIC17.07■□□□□ 0.32
MT-ND1P03886 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND1P03886 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND1P03886 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND1P03886 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND1P03886 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND1P03886 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND1P03886 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND1P03886 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
MT-ND1P03886 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.07■□□□□ 0.32
MT-ND1P03886 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
MT-ND1P03886 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MT-ND1P03886 AL109659.2-201ENST00000606809 1674 ntBASIC17.07■□□□□ 0.32
MT-ND1P03886 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND1P03886 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND1P03886 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.06■□□□□ 0.32
MT-ND1P03886 UBALD1-205ENST00000590891 2641 ntBASIC17.06■□□□□ 0.32
MT-ND1P03886 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND1P03886 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND1P03886 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
MT-ND1P03886 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.06■□□□□ 0.32
MT-ND1P03886 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND1P03886 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND1P03886 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.06■□□□□ 0.32
MT-ND1P03886 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND1P03886 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
MT-ND1P03886 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND1P03886 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.06■□□□□ 0.32
MT-ND1P03886 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.06■□□□□ 0.32
MT-ND1P03886 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.06■□□□□ 0.32
MT-ND1P03886 AC073195.1-201ENST00000607241 877 ntBASIC17.06■□□□□ 0.32
MT-ND1P03886 AC011298.2-201ENST00000617989 482 ntBASIC17.06■□□□□ 0.32
MT-ND1P03886 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND1P03886 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND1P03886 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
MT-ND1P03886 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND1P03886 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.06■□□□□ 0.32
MT-ND1P03886 AL023806.1-201ENST00000603994 1649 ntBASIC17.06■□□□□ 0.32
MT-ND1P03886 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND1P03886 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND1P03886 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.06■□□□□ 0.32
MT-ND1P03886 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-ND1P03886 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
MT-ND1P03886 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND1P03886 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
MT-ND1P03886 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND1P03886 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND1P03886 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND1P03886 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND1P03886 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
MT-ND1P03886 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND1P03886 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
MT-ND1P03886 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.05■□□□□ 0.32
MT-ND1P03886 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND1P03886 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND1P03886 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-ND1P03886 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
MT-ND1P03886 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
MT-ND1P03886 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.05■□□□□ 0.32
MT-ND1P03886 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.05■□□□□ 0.32
MT-ND1P03886 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
MT-ND1P03886 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.05■□□□□ 0.32
MT-ND1P03886 AC008622.2-201ENST00000617006 1229 ntBASIC17.05■□□□□ 0.32
MT-ND1P03886 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
MT-ND1P03886 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms