Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
CLSTN1O94985 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLSTN1O94985 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.01■□□□□ 0.79
CLSTN1O94985 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLSTN1O94985 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLSTN1O94985 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLSTN1O94985 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLSTN1O94985 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLSTN1O94985 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLSTN1O94985 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20■□□□□ 0.79
CLSTN1O94985 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLSTN1O94985 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLSTN1O94985 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CLSTN1O94985 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20■□□□□ 0.79
CLSTN1O94985 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLSTN1O94985 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLSTN1O94985 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20■□□□□ 0.79
CLSTN1O94985 AC092647.4-201ENST00000457211 535 ntBASIC20■□□□□ 0.79
CLSTN1O94985 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20■□□□□ 0.79
CLSTN1O94985 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
CLSTN1O94985 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLSTN1O94985 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CLSTN1O94985 WWOX-216ENST00000569818 525 ntBASIC20■□□□□ 0.79
CLSTN1O94985 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20■□□□□ 0.79
CLSTN1O94985 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20■□□□□ 0.79
CLSTN1O94985 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20■□□□□ 0.79
CLSTN1O94985 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLSTN1O94985 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLSTN1O94985 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CLSTN1O94985 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
CLSTN1O94985 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20■□□□□ 0.79
CLSTN1O94985 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20■□□□□ 0.79
CLSTN1O94985 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CLSTN1O94985 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CLSTN1O94985 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CLSTN1O94985 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLSTN1O94985 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLSTN1O94985 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLSTN1O94985 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLSTN1O94985 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.99■□□□□ 0.79
CLSTN1O94985 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLSTN1O94985 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.99■□□□□ 0.79
CLSTN1O94985 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLSTN1O94985 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.99■□□□□ 0.79
CLSTN1O94985 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLSTN1O94985 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CLSTN1O94985 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLSTN1O94985 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CLSTN1O94985 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.99■□□□□ 0.79
CLSTN1O94985 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.99■□□□□ 0.79
CLSTN1O94985 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.99■□□□□ 0.79
CLSTN1O94985 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLSTN1O94985 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CLSTN1O94985 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.99■□□□□ 0.79
CLSTN1O94985 COX11P1-201ENST00000489116 835 ntBASIC19.99■□□□□ 0.79
CLSTN1O94985 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
CLSTN1O94985 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.99■□□□□ 0.79
CLSTN1O94985 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.99■□□□□ 0.79
CLSTN1O94985 AC139887.4-201ENST00000607877 719 ntBASIC19.99■□□□□ 0.79
CLSTN1O94985 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLSTN1O94985 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLSTN1O94985 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.99■□□□□ 0.79
CLSTN1O94985 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLSTN1O94985 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CLSTN1O94985 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CLSTN1O94985 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLSTN1O94985 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLSTN1O94985 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLSTN1O94985 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLSTN1O94985 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLSTN1O94985 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLSTN1O94985 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLSTN1O94985 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CLSTN1O94985 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLSTN1O94985 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLSTN1O94985 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CLSTN1O94985 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLSTN1O94985 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CLSTN1O94985 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLSTN1O94985 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
CLSTN1O94985 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLSTN1O94985 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
CLSTN1O94985 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLSTN1O94985 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.98■□□□□ 0.79
CLSTN1O94985 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CLSTN1O94985 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.98■□□□□ 0.79
CLSTN1O94985 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.98■□□□□ 0.79
CLSTN1O94985 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.98■□□□□ 0.79
CLSTN1O94985 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLSTN1O94985 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLSTN1O94985 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.98■□□□□ 0.79
CLSTN1O94985 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CLSTN1O94985 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.98■□□□□ 0.79
CLSTN1O94985 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLSTN1O94985 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLSTN1O94985 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLSTN1O94985 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLSTN1O94985 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLSTN1O94985 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLSTN1O94985 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms