Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
PCF11O94913 SOD2-201ENST00000337404 991 ntTSL 2 BASIC28■■■□□ 2.07
PCF11O94913 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC28■■■□□ 2.07
PCF11O94913 ELK2BP-201ENST00000415014 1224 ntBASIC28■■■□□ 2.07
PCF11O94913 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC28■■■□□ 2.07
PCF11O94913 Z83851.2-201ENST00000609564 659 ntBASIC28■■■□□ 2.07
PCF11O94913 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC28■■■□□ 2.07
PCF11O94913 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
PCF11O94913 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC28■■■□□ 2.07
PCF11O94913 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC28■■■□□ 2.07
PCF11O94913 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC28■■■□□ 2.07
PCF11O94913 AC104109.2-201ENST00000602919 1418 ntBASIC27.99■■■□□ 2.07
PCF11O94913 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC27.99■■■□□ 2.07
PCF11O94913 CENPM-204ENST00000402420 688 ntTSL 5 BASIC27.99■■■□□ 2.07
PCF11O94913 RPL13AP23-201ENST00000480739 586 ntBASIC27.99■■■□□ 2.07
PCF11O94913 COX5A-204ENST00000567270 579 ntTSL 3 BASIC27.99■■■□□ 2.07
PCF11O94913 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC27.99■■■□□ 2.07
PCF11O94913 WIZP1-201ENST00000531444 2299 ntBASIC27.99■■■□□ 2.07
PCF11O94913 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
PCF11O94913 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC27.99■■■□□ 2.07
PCF11O94913 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
PCF11O94913 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
PCF11O94913 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC27.99■■■□□ 2.07
PCF11O94913 AC093677.2-201ENST00000600169 1863 ntBASIC27.99■■■□□ 2.07
PCF11O94913 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
PCF11O94913 SPDYE21P-201ENST00000413323 827 ntBASIC27.99■■■□□ 2.07
PCF11O94913 UPF3AP3-201ENST00000420996 769 ntBASIC27.99■■■□□ 2.07
PCF11O94913 AC244107.1-201ENST00000442033 332 ntBASIC27.99■■■□□ 2.07
PCF11O94913 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC27.99■■■□□ 2.07
PCF11O94913 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC27.99■■■□□ 2.07
PCF11O94913 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC27.99■■■□□ 2.07
PCF11O94913 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
PCF11O94913 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
PCF11O94913 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC27.98■■■□□ 2.07
PCF11O94913 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC27.98■■■□□ 2.07
PCF11O94913 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
PCF11O94913 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
PCF11O94913 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC27.98■■■□□ 2.07
PCF11O94913 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
PCF11O94913 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
PCF11O94913 KLF4P1-201ENST00000412782 1185 ntBASIC27.98■■■□□ 2.07
PCF11O94913 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC27.98■■■□□ 2.07
PCF11O94913 AC019129.2-201ENST00000609837 1235 ntBASIC27.98■■■□□ 2.07
PCF11O94913 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
PCF11O94913 AL353593.2-201ENST00000602529 1483 ntBASIC27.98■■■□□ 2.07
PCF11O94913 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
PCF11O94913 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
PCF11O94913 AC097374.2-201ENST00000618617 1306 ntBASIC27.97■■■□□ 2.07
PCF11O94913 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
PCF11O94913 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
PCF11O94913 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
PCF11O94913 POR-209ENST00000439269 1858 ntTSL 2 BASIC27.97■■■□□ 2.07
PCF11O94913 LBH-204ENST00000406087 559 ntTSL 4 BASIC27.97■■■□□ 2.07
PCF11O94913 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC27.97■■■□□ 2.07
PCF11O94913 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
PCF11O94913 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
PCF11O94913 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC27.97■■■□□ 2.07
PCF11O94913 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
PCF11O94913 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
PCF11O94913 HLA-J-201ENST00000462773 1622 ntBASIC27.97■■■□□ 2.07
PCF11O94913 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
PCF11O94913 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
PCF11O94913 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC27.96■■■□□ 2.07
PCF11O94913 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC27.96■■■□□ 2.07
PCF11O94913 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
PCF11O94913 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC27.96■■■□□ 2.07
PCF11O94913 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC27.96■■■□□ 2.07
PCF11O94913 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC27.96■■■□□ 2.07
PCF11O94913 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
PCF11O94913 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
PCF11O94913 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
PCF11O94913 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC27.96■■■□□ 2.07
PCF11O94913 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
PCF11O94913 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC27.96■■■□□ 2.07
PCF11O94913 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
PCF11O94913 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
PCF11O94913 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC27.96■■■□□ 2.07
PCF11O94913 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
PCF11O94913 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
PCF11O94913 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
PCF11O94913 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC27.95■■■□□ 2.07
PCF11O94913 AC073621.1-201ENST00000392730 636 ntBASIC27.95■■■□□ 2.07
PCF11O94913 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC27.95■■■□□ 2.07
PCF11O94913 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC27.95■■■□□ 2.07
PCF11O94913 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC27.95■■■□□ 2.07
PCF11O94913 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
PCF11O94913 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC27.95■■■□□ 2.07
PCF11O94913 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC27.95■■■□□ 2.06
PCF11O94913 AC093503.3-201ENST00000624917 2352 ntBASIC27.95■■■□□ 2.06
PCF11O94913 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
PCF11O94913 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
PCF11O94913 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC27.94■■■□□ 2.06
PCF11O94913 MED15P5-201ENST00000423150 992 ntBASIC27.94■■■□□ 2.06
PCF11O94913 GPX1P2-201ENST00000429271 606 ntBASIC27.94■■■□□ 2.06
PCF11O94913 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC27.94■■■□□ 2.06
PCF11O94913 ETFA-208ENST00000559602 792 ntTSL 3 BASIC27.94■■■□□ 2.06
PCF11O94913 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC27.94■■■□□ 2.06
PCF11O94913 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
PCF11O94913 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC27.94■■■□□ 2.06
PCF11O94913 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms