Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.39■□□□□ 0.37
PRAMEF4O60810 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
PRAMEF4O60810 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.39■□□□□ 0.37
PRAMEF4O60810 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PRAMEF4O60810 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PRAMEF4O60810 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF4O60810 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.39■□□□□ 0.37
PRAMEF4O60810 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF4O60810 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.39■□□□□ 0.37
PRAMEF4O60810 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF4O60810 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF4O60810 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PRAMEF4O60810 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.39■□□□□ 0.37
PRAMEF4O60810 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF4O60810 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF4O60810 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.38■□□□□ 0.37
PRAMEF4O60810 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.38■□□□□ 0.37
PRAMEF4O60810 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF4O60810 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.38■□□□□ 0.37
PRAMEF4O60810 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
PRAMEF4O60810 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF4O60810 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.38■□□□□ 0.37
PRAMEF4O60810 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF4O60810 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF4O60810 GNAS-203ENST00000306120 1878 ntBASIC17.38■□□□□ 0.37
PRAMEF4O60810 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF4O60810 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.38■□□□□ 0.37
PRAMEF4O60810 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF4O60810 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.38■□□□□ 0.37
PRAMEF4O60810 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF4O60810 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF4O60810 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF4O60810 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.38■□□□□ 0.37
PRAMEF4O60810 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.38■□□□□ 0.37
PRAMEF4O60810 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF4O60810 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.38■□□□□ 0.37
PRAMEF4O60810 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.38■□□□□ 0.37
PRAMEF4O60810 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
PRAMEF4O60810 AC083849.1-201ENST00000615227 514 ntBASIC17.38■□□□□ 0.37
PRAMEF4O60810 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PRAMEF4O60810 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.38■□□□□ 0.37
PRAMEF4O60810 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF4O60810 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF4O60810 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF4O60810 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF4O60810 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF4O60810 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF4O60810 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF4O60810 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.38■□□□□ 0.37
PRAMEF4O60810 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF4O60810 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.38■□□□□ 0.37
PRAMEF4O60810 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF4O60810 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF4O60810 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF4O60810 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.37■□□□□ 0.37
PRAMEF4O60810 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF4O60810 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF4O60810 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.37■□□□□ 0.37
PRAMEF4O60810 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.37■□□□□ 0.37
PRAMEF4O60810 TMPOP1-202ENST00000424642 1267 ntBASIC17.37■□□□□ 0.37
PRAMEF4O60810 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF4O60810 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PRAMEF4O60810 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.37■□□□□ 0.37
PRAMEF4O60810 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.37■□□□□ 0.37
PRAMEF4O60810 AC022616.7-201ENST00000525383 220 ntBASIC17.37■□□□□ 0.37
PRAMEF4O60810 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.37■□□□□ 0.37
PRAMEF4O60810 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.37■□□□□ 0.37
PRAMEF4O60810 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PRAMEF4O60810 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF4O60810 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF4O60810 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF4O60810 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF4O60810 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
PRAMEF4O60810 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF4O60810 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PRAMEF4O60810 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF4O60810 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF4O60810 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.36■□□□□ 0.37
PRAMEF4O60810 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF4O60810 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PRAMEF4O60810 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF4O60810 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.36■□□□□ 0.37
PRAMEF4O60810 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PRAMEF4O60810 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.36■□□□□ 0.37
PRAMEF4O60810 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF4O60810 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF4O60810 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.36■□□□□ 0.37
PRAMEF4O60810 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF4O60810 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF4O60810 KRT18P48-201ENST00000434763 852 ntBASIC17.36■□□□□ 0.37
PRAMEF4O60810 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.36■□□□□ 0.37
PRAMEF4O60810 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.36■□□□□ 0.37
PRAMEF4O60810 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.36■□□□□ 0.37
PRAMEF4O60810 RNF126P1-202ENST00000569893 925 ntBASIC17.36■□□□□ 0.37
PRAMEF4O60810 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF4O60810 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF4O60810 AC008687.5-201ENST00000593746 558 ntBASIC17.36■□□□□ 0.37
PRAMEF4O60810 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF4O60810 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF4O60810 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms