Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
GRIN3BO60391 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
GRIN3BO60391 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.9■■□□□ 1.1
GRIN3BO60391 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC21.9■■□□□ 1.1
GRIN3BO60391 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC21.9■■□□□ 1.1
GRIN3BO60391 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC21.9■■□□□ 1.1
GRIN3BO60391 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
GRIN3BO60391 MIR6799-201ENST00000620297 69 ntBASIC21.9■■□□□ 1.1
GRIN3BO60391 AC009093.7-201ENST00000623853 1223 ntBASIC21.9■■□□□ 1.1
GRIN3BO60391 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GRIN3BO60391 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
GRIN3BO60391 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC21.89■■□□□ 1.1
GRIN3BO60391 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
GRIN3BO60391 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC21.89■■□□□ 1.09
GRIN3BO60391 POLD4-207ENST00000531239 584 ntTSL 2 BASIC21.89■■□□□ 1.09
GRIN3BO60391 VPS29-207ENST00000549970 818 ntTSL 3 BASIC21.89■■□□□ 1.09
GRIN3BO60391 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
GRIN3BO60391 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC21.89■■□□□ 1.09
GRIN3BO60391 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
GRIN3BO60391 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
GRIN3BO60391 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
GRIN3BO60391 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.89■■□□□ 1.09
GRIN3BO60391 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.89■■□□□ 1.09
GRIN3BO60391 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.89■■□□□ 1.09
GRIN3BO60391 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.88■■□□□ 1.09
GRIN3BO60391 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GRIN3BO60391 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
GRIN3BO60391 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
GRIN3BO60391 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
GRIN3BO60391 GABARAPL3-202ENST00000624044 1851 ntBASIC21.88■■□□□ 1.09
GRIN3BO60391 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GRIN3BO60391 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GRIN3BO60391 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC21.88■■□□□ 1.09
GRIN3BO60391 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC21.88■■□□□ 1.09
GRIN3BO60391 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC21.88■■□□□ 1.09
GRIN3BO60391 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC21.88■■□□□ 1.09
GRIN3BO60391 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
GRIN3BO60391 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
GRIN3BO60391 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GRIN3BO60391 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC21.88■■□□□ 1.09
GRIN3BO60391 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
GRIN3BO60391 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GRIN3BO60391 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GRIN3BO60391 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.87■■□□□ 1.09
GRIN3BO60391 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
GRIN3BO60391 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GRIN3BO60391 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
GRIN3BO60391 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
GRIN3BO60391 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GRIN3BO60391 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GRIN3BO60391 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GRIN3BO60391 MIR943-201ENST00000401286 94 ntBASIC21.87■■□□□ 1.09
GRIN3BO60391 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC21.87■■□□□ 1.09
GRIN3BO60391 UGT1A2P-201ENST00000454886 866 ntBASIC21.87■■□□□ 1.09
GRIN3BO60391 AC051619.7-201ENST00000568314 623 ntBASIC21.87■■□□□ 1.09
GRIN3BO60391 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC21.87■■□□□ 1.09
GRIN3BO60391 AC073592.5-201ENST00000624854 528 ntBASIC21.87■■□□□ 1.09
GRIN3BO60391 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC21.87■■□□□ 1.09
GRIN3BO60391 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GRIN3BO60391 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GRIN3BO60391 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GRIN3BO60391 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
GRIN3BO60391 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
GRIN3BO60391 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.87■■□□□ 1.09
GRIN3BO60391 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GRIN3BO60391 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
GRIN3BO60391 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GRIN3BO60391 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
GRIN3BO60391 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC21.87■■□□□ 1.09
GRIN3BO60391 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC21.87■■□□□ 1.09
GRIN3BO60391 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
GRIN3BO60391 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
GRIN3BO60391 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
GRIN3BO60391 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
GRIN3BO60391 AL024508.2-201ENST00000607749 1894 ntBASIC21.86■■□□□ 1.09
GRIN3BO60391 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.86■■□□□ 1.09
GRIN3BO60391 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
GRIN3BO60391 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC21.86■■□□□ 1.09
GRIN3BO60391 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
GRIN3BO60391 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC21.86■■□□□ 1.09
GRIN3BO60391 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC21.86■■□□□ 1.09
GRIN3BO60391 NME2P1-201ENST00000426182 414 ntBASIC21.86■■□□□ 1.09
GRIN3BO60391 ATP5G2P4-201ENST00000442175 420 ntBASIC21.86■■□□□ 1.09
GRIN3BO60391 CRB3P1-201ENST00000449338 276 ntBASIC21.86■■□□□ 1.09
GRIN3BO60391 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
GRIN3BO60391 CIPC-205ENST00000555437 566 ntTSL 3 BASIC21.86■■□□□ 1.09
GRIN3BO60391 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC21.86■■□□□ 1.09
GRIN3BO60391 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC21.86■■□□□ 1.09
GRIN3BO60391 AL606495.2-201ENST00000605867 535 ntBASIC21.86■■□□□ 1.09
GRIN3BO60391 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
GRIN3BO60391 NCF1C-201ENST00000438382 1427 ntBASIC21.86■■□□□ 1.09
GRIN3BO60391 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
GRIN3BO60391 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
GRIN3BO60391 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC21.86■■□□□ 1.09
GRIN3BO60391 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
GRIN3BO60391 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.86■■□□□ 1.09
GRIN3BO60391 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.85■■□□□ 1.09
GRIN3BO60391 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
GRIN3BO60391 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
GRIN3BO60391 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms