Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SSSCA1O60232 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSSCA1O60232 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SSSCA1O60232 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSSCA1O60232 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSSCA1O60232 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSSCA1O60232 AL109659.2-201ENST00000606809 1674 ntBASIC14.77□□□□□ -0.05
SSSCA1O60232 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SSSCA1O60232 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC14.77□□□□□ -0.05
SSSCA1O60232 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSSCA1O60232 KRT18P55-202ENST00000578578 1546 ntBASIC14.76□□□□□ -0.05
SSSCA1O60232 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SSSCA1O60232 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSSCA1O60232 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.76□□□□□ -0.05
SSSCA1O60232 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SSSCA1O60232 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.76□□□□□ -0.05
SSSCA1O60232 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSSCA1O60232 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC14.76□□□□□ -0.05
SSSCA1O60232 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSSCA1O60232 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
SSSCA1O60232 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSSCA1O60232 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSSCA1O60232 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SSSCA1O60232 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SSSCA1O60232 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSSCA1O60232 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSSCA1O60232 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SSSCA1O60232 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSSCA1O60232 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSSCA1O60232 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSSCA1O60232 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC14.76□□□□□ -0.05
SSSCA1O60232 AC026271.2-201ENST00000428091 497 ntBASIC14.76□□□□□ -0.05
SSSCA1O60232 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.76□□□□□ -0.05
SSSCA1O60232 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SSSCA1O60232 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC14.76□□□□□ -0.05
SSSCA1O60232 AC131212.4-201ENST00000623606 975 ntBASIC14.76□□□□□ -0.05
SSSCA1O60232 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.76□□□□□ -0.05
SSSCA1O60232 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSSCA1O60232 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
SSSCA1O60232 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSSCA1O60232 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SSSCA1O60232 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSSCA1O60232 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SSSCA1O60232 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
SSSCA1O60232 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SSSCA1O60232 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSSCA1O60232 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.76□□□□□ -0.05
SSSCA1O60232 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.76□□□□□ -0.05
SSSCA1O60232 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.76□□□□□ -0.05
SSSCA1O60232 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSSCA1O60232 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SSSCA1O60232 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSSCA1O60232 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSSCA1O60232 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.75□□□□□ -0.05
SSSCA1O60232 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
SSSCA1O60232 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.75□□□□□ -0.05
SSSCA1O60232 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSSCA1O60232 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SSSCA1O60232 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSSCA1O60232 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSSCA1O60232 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSSCA1O60232 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSSCA1O60232 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SSSCA1O60232 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SSSCA1O60232 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSSCA1O60232 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.75□□□□□ -0.05
SSSCA1O60232 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.75□□□□□ -0.05
SSSCA1O60232 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSSCA1O60232 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.75□□□□□ -0.05
SSSCA1O60232 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSSCA1O60232 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSSCA1O60232 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSSCA1O60232 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSSCA1O60232 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSSCA1O60232 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSSCA1O60232 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SSSCA1O60232 GUSBP6-202ENST00000438529 1198 ntBASIC14.75□□□□□ -0.05
SSSCA1O60232 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SSSCA1O60232 UNC93B4-201ENST00000505679 747 ntBASIC14.75□□□□□ -0.05
SSSCA1O60232 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14.75□□□□□ -0.05
SSSCA1O60232 TK2-208ENST00000545043 1120 ntTSL 2 BASIC14.75□□□□□ -0.05
SSSCA1O60232 RARRES2P6-201ENST00000567333 442 ntBASIC14.75□□□□□ -0.05
SSSCA1O60232 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC14.75□□□□□ -0.05
SSSCA1O60232 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
SSSCA1O60232 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.75□□□□□ -0.05
SSSCA1O60232 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSSCA1O60232 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SSSCA1O60232 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSSCA1O60232 AL355312.1-201ENST00000407115 2176 ntBASIC14.75□□□□□ -0.05
SSSCA1O60232 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSSCA1O60232 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSSCA1O60232 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SSSCA1O60232 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.75□□□□□ -0.05
SSSCA1O60232 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
SSSCA1O60232 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.75□□□□□ -0.05
SSSCA1O60232 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
SSSCA1O60232 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSSCA1O60232 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSSCA1O60232 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.75□□□□□ -0.05
SSSCA1O60232 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms