Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSX5O60225 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSX5O60225 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSX5O60225 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSX5O60225 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSX5O60225 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SSX5O60225 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SSX5O60225 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SSX5O60225 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.52■□□□□ 0.08
SSX5O60225 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
SSX5O60225 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SSX5O60225 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.52■□□□□ 0.08
SSX5O60225 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
SSX5O60225 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.52■□□□□ 0.08
SSX5O60225 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SSX5O60225 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
SSX5O60225 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SSX5O60225 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SSX5O60225 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.52■□□□□ 0.08
SSX5O60225 NIFKP9-201ENST00000419265 221 ntBASIC15.52■□□□□ 0.08
SSX5O60225 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SSX5O60225 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SSX5O60225 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.52■□□□□ 0.08
SSX5O60225 AC142086.2-201ENST00000569753 217 ntBASIC15.52■□□□□ 0.08
SSX5O60225 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.52■□□□□ 0.08
SSX5O60225 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
SSX5O60225 AL109923.1-201ENST00000618799 583 ntBASIC15.52■□□□□ 0.08
SSX5O60225 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.52■□□□□ 0.08
SSX5O60225 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SSX5O60225 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
SSX5O60225 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.52■□□□□ 0.07
SSX5O60225 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
SSX5O60225 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
SSX5O60225 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SSX5O60225 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.52■□□□□ 0.07
SSX5O60225 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.52■□□□□ 0.07
SSX5O60225 AL162727.3-201ENST00000635661 2787 ntBASIC15.52■□□□□ 0.07
SSX5O60225 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SSX5O60225 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SSX5O60225 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SSX5O60225 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.51■□□□□ 0.07
SSX5O60225 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSX5O60225 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSX5O60225 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.51■□□□□ 0.07
SSX5O60225 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSX5O60225 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.51■□□□□ 0.07
SSX5O60225 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.51■□□□□ 0.07
SSX5O60225 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SSX5O60225 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSX5O60225 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SSX5O60225 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSX5O60225 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SSX5O60225 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSX5O60225 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.51■□□□□ 0.07
SSX5O60225 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSX5O60225 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSX5O60225 MIR564-202ENST00000385049 94 ntBASIC15.51■□□□□ 0.07
SSX5O60225 AP000593.1-201ENST00000393668 712 ntBASIC15.51■□□□□ 0.07
SSX5O60225 AC004951.3-201ENST00000418645 1148 ntBASIC15.51■□□□□ 0.07
SSX5O60225 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.51■□□□□ 0.07
SSX5O60225 AC008040.2-201ENST00000461049 708 ntBASIC15.51■□□□□ 0.07
SSX5O60225 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.51■□□□□ 0.07
SSX5O60225 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC15.51■□□□□ 0.07
SSX5O60225 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.51■□□□□ 0.07
SSX5O60225 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.51■□□□□ 0.07
SSX5O60225 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.51■□□□□ 0.07
SSX5O60225 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.51■□□□□ 0.07
SSX5O60225 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSX5O60225 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SSX5O60225 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
SSX5O60225 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSX5O60225 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSX5O60225 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SSX5O60225 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
SSX5O60225 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
SSX5O60225 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SSX5O60225 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SSX5O60225 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SSX5O60225 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SSX5O60225 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SSX5O60225 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SSX5O60225 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SSX5O60225 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
SSX5O60225 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
SSX5O60225 GAS7-202ENST00000396115 929 ntTSL 5 BASIC15.5■□□□□ 0.07
SSX5O60225 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
SSX5O60225 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.5■□□□□ 0.07
SSX5O60225 AC239809.2-201ENST00000415381 517 ntBASIC15.5■□□□□ 0.07
SSX5O60225 KRT17P3-201ENST00000420566 1262 ntBASIC15.5■□□□□ 0.07
SSX5O60225 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SSX5O60225 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.5■□□□□ 0.07
SSX5O60225 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC15.5■□□□□ 0.07
SSX5O60225 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SSX5O60225 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
SSX5O60225 AC008622.2-201ENST00000617006 1229 ntBASIC15.5■□□□□ 0.07
SSX5O60225 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SSX5O60225 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.5■□□□□ 0.07
SSX5O60225 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SSX5O60225 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
SSX5O60225 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms