Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDE6DO43924 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.03□□□□□ -0.16
PDE6DO43924 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
PDE6DO43924 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDE6DO43924 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.03□□□□□ -0.16
PDE6DO43924 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
PDE6DO43924 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDE6DO43924 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.03□□□□□ -0.16
PDE6DO43924 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDE6DO43924 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDE6DO43924 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDE6DO43924 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.03□□□□□ -0.16
PDE6DO43924 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PDE6DO43924 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDE6DO43924 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDE6DO43924 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDE6DO43924 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDE6DO43924 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDE6DO43924 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDE6DO43924 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
PDE6DO43924 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
PDE6DO43924 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
PDE6DO43924 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDE6DO43924 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
PDE6DO43924 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDE6DO43924 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.02□□□□□ -0.16
PDE6DO43924 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.02□□□□□ -0.16
PDE6DO43924 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
PDE6DO43924 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDE6DO43924 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
PDE6DO43924 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDE6DO43924 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PDE6DO43924 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDE6DO43924 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC14.02□□□□□ -0.16
PDE6DO43924 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDE6DO43924 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDE6DO43924 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PDE6DO43924 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDE6DO43924 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDE6DO43924 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDE6DO43924 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC14.02□□□□□ -0.17
PDE6DO43924 POU5F1P3-201ENST00000428824 1078 ntBASIC14.02□□□□□ -0.17
PDE6DO43924 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC14.02□□□□□ -0.17
PDE6DO43924 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC14.02□□□□□ -0.17
PDE6DO43924 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
PDE6DO43924 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDE6DO43924 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.02□□□□□ -0.17
PDE6DO43924 PRSS44-201ENST00000515154 1146 ntBASIC14.02□□□□□ -0.17
PDE6DO43924 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDE6DO43924 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC14.02□□□□□ -0.17
PDE6DO43924 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDE6DO43924 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.02□□□□□ -0.17
PDE6DO43924 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDE6DO43924 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PDE6DO43924 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDE6DO43924 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.02□□□□□ -0.17
PDE6DO43924 PCDHA14-201ENST00000506751 2298 ntBASIC14.02□□□□□ -0.17
PDE6DO43924 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.02□□□□□ -0.17
PDE6DO43924 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDE6DO43924 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDE6DO43924 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.02□□□□□ -0.17
PDE6DO43924 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDE6DO43924 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDE6DO43924 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
PDE6DO43924 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDE6DO43924 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDE6DO43924 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDE6DO43924 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.01□□□□□ -0.17
PDE6DO43924 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PDE6DO43924 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDE6DO43924 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDE6DO43924 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.01□□□□□ -0.17
PDE6DO43924 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDE6DO43924 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PDE6DO43924 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDE6DO43924 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDE6DO43924 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.01□□□□□ -0.17
PDE6DO43924 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDE6DO43924 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PDE6DO43924 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDE6DO43924 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PDE6DO43924 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC14.01□□□□□ -0.17
PDE6DO43924 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC14.01□□□□□ -0.17
PDE6DO43924 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.01□□□□□ -0.17
PDE6DO43924 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.01□□□□□ -0.17
PDE6DO43924 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
PDE6DO43924 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PDE6DO43924 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PDE6DO43924 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.01□□□□□ -0.17
PDE6DO43924 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
PDE6DO43924 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDE6DO43924 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.01□□□□□ -0.17
PDE6DO43924 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.01□□□□□ -0.17
PDE6DO43924 AC106886.4-201ENST00000623557 2502 ntBASIC14.01□□□□□ -0.17
PDE6DO43924 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PDE6DO43924 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDE6DO43924 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDE6DO43924 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDE6DO43924 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDE6DO43924 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms