Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFS4O43181 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFS4O43181 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFS4O43181 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFS4O43181 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFS4O43181 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.31■□□□□ 0.36
NDUFS4O43181 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NDUFS4O43181 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFS4O43181 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
NDUFS4O43181 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NDUFS4O43181 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFS4O43181 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFS4O43181 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFS4O43181 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFS4O43181 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.31■□□□□ 0.36
NDUFS4O43181 IGHGP-201ENST00000390555 1178 ntBASIC17.31■□□□□ 0.36
NDUFS4O43181 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.31■□□□□ 0.36
NDUFS4O43181 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.31■□□□□ 0.36
NDUFS4O43181 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.31■□□□□ 0.36
NDUFS4O43181 FAM86EP-206ENST00000510506 987 ntBASIC17.31■□□□□ 0.36
NDUFS4O43181 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.31■□□□□ 0.36
NDUFS4O43181 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.31■□□□□ 0.36
NDUFS4O43181 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.31■□□□□ 0.36
NDUFS4O43181 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.31■□□□□ 0.36
NDUFS4O43181 AC005332.3-201ENST00000589904 676 ntBASIC17.31■□□□□ 0.36
NDUFS4O43181 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.31■□□□□ 0.36
NDUFS4O43181 GPR32P1-201ENST00000601788 811 ntBASIC17.31■□□□□ 0.36
NDUFS4O43181 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFS4O43181 Z83836.1-201ENST00000624605 1642 ntBASIC17.31■□□□□ 0.36
NDUFS4O43181 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFS4O43181 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFS4O43181 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFS4O43181 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFS4O43181 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
NDUFS4O43181 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFS4O43181 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFS4O43181 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NDUFS4O43181 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.31■□□□□ 0.36
NDUFS4O43181 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
NDUFS4O43181 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFS4O43181 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
NDUFS4O43181 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFS4O43181 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFS4O43181 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NDUFS4O43181 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFS4O43181 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFS4O43181 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.3■□□□□ 0.36
NDUFS4O43181 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFS4O43181 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.3■□□□□ 0.36
NDUFS4O43181 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFS4O43181 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFS4O43181 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFS4O43181 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFS4O43181 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFS4O43181 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.3■□□□□ 0.36
NDUFS4O43181 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.3■□□□□ 0.36
NDUFS4O43181 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFS4O43181 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFS4O43181 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.3■□□□□ 0.36
NDUFS4O43181 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFS4O43181 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.3■□□□□ 0.36
NDUFS4O43181 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.3■□□□□ 0.36
NDUFS4O43181 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.3■□□□□ 0.36
NDUFS4O43181 RNF126P1-202ENST00000569893 925 ntBASIC17.3■□□□□ 0.36
NDUFS4O43181 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFS4O43181 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.3■□□□□ 0.36
NDUFS4O43181 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.3■□□□□ 0.36
NDUFS4O43181 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NDUFS4O43181 AC004263.2-201ENST00000617183 678 ntBASIC17.3■□□□□ 0.36
NDUFS4O43181 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.3■□□□□ 0.36
NDUFS4O43181 AC018470.1-201ENST00000624790 3129 ntBASIC17.3■□□□□ 0.36
NDUFS4O43181 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.3■□□□□ 0.36
NDUFS4O43181 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFS4O43181 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
NDUFS4O43181 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
NDUFS4O43181 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFS4O43181 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFS4O43181 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFS4O43181 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NDUFS4O43181 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NDUFS4O43181 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.29■□□□□ 0.36
NDUFS4O43181 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS4O43181 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.29■□□□□ 0.36
NDUFS4O43181 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS4O43181 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS4O43181 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS4O43181 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS4O43181 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS4O43181 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS4O43181 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NDUFS4O43181 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS4O43181 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NDUFS4O43181 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS4O43181 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
NDUFS4O43181 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS4O43181 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.29■□□□□ 0.36
NDUFS4O43181 PCED1CP-201ENST00000419887 785 ntBASIC17.29■□□□□ 0.36
NDUFS4O43181 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDUFS4O43181 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.29■□□□□ 0.36
NDUFS4O43181 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms