Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 GID4-202ENST00000376345 1391 ntTSL 3 BASIC24.94■■□□□ 1.58
CHD2O14647 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC24.94■■□□□ 1.58
CHD2O14647 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHD2O14647 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC24.94■■□□□ 1.58
CHD2O14647 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CHD2O14647 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
CHD2O14647 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC24.94■■□□□ 1.58
CHD2O14647 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CHD2O14647 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC24.94■■□□□ 1.58
CHD2O14647 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC24.94■■□□□ 1.58
CHD2O14647 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC24.94■■□□□ 1.58
CHD2O14647 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
CHD2O14647 AC068137.2-201ENST00000605408 478 ntBASIC24.94■■□□□ 1.58
CHD2O14647 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC24.94■■□□□ 1.58
CHD2O14647 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC24.94■■□□□ 1.58
CHD2O14647 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
CHD2O14647 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
CHD2O14647 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHD2O14647 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC24.94■■□□□ 1.58
CHD2O14647 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC24.94■■□□□ 1.58
CHD2O14647 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC24.94■■□□□ 1.58
CHD2O14647 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CHD2O14647 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHD2O14647 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC24.93■■□□□ 1.58
CHD2O14647 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHD2O14647 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHD2O14647 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC24.93■■□□□ 1.58
CHD2O14647 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC24.93■■□□□ 1.58
CHD2O14647 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHD2O14647 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHD2O14647 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHD2O14647 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHD2O14647 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHD2O14647 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHD2O14647 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
CHD2O14647 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHD2O14647 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC24.93■■□□□ 1.58
CHD2O14647 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC24.93■■□□□ 1.58
CHD2O14647 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC24.93■■□□□ 1.58
CHD2O14647 ACTG1P14-201ENST00000446382 1122 ntBASIC24.93■■□□□ 1.58
CHD2O14647 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC24.93■■□□□ 1.58
CHD2O14647 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
CHD2O14647 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC24.93■■□□□ 1.58
CHD2O14647 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
CHD2O14647 AC138761.1-201ENST00000584393 385 ntBASIC24.93■■□□□ 1.58
CHD2O14647 AC022145.2-201ENST00000598203 171 ntBASIC24.93■■□□□ 1.58
CHD2O14647 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CHD2O14647 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CHD2O14647 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
CHD2O14647 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHD2O14647 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHD2O14647 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHD2O14647 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHD2O14647 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
CHD2O14647 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
CHD2O14647 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC24.92■■□□□ 1.58
CHD2O14647 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CHD2O14647 HLA-J-202ENST00000469281 1241 ntBASIC24.92■■□□□ 1.58
CHD2O14647 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC24.92■■□□□ 1.58
CHD2O14647 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC24.92■■□□□ 1.58
CHD2O14647 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC24.92■■□□□ 1.58
CHD2O14647 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHD2O14647 USP39-202ENST00000409025 1946 ntTSL 5 BASIC24.92■■□□□ 1.58
CHD2O14647 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
CHD2O14647 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC24.92■■□□□ 1.58
CHD2O14647 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CHD2O14647 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC24.91■■□□□ 1.58
CHD2O14647 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC24.91■■□□□ 1.58
CHD2O14647 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
CHD2O14647 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHD2O14647 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC24.91■■□□□ 1.58
CHD2O14647 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC24.91■■□□□ 1.58
CHD2O14647 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC24.91■■□□□ 1.58
CHD2O14647 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHD2O14647 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CHD2O14647 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC24.91■■□□□ 1.58
CHD2O14647 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHD2O14647 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHD2O14647 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CHD2O14647 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC24.91■■□□□ 1.58
CHD2O14647 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC24.91■■□□□ 1.58
CHD2O14647 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC24.91■■□□□ 1.58
CHD2O14647 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CHD2O14647 PNKD-204ENST00000436005 978 ntTSL 5 BASIC24.91■■□□□ 1.58
CHD2O14647 PAWRP1-201ENST00000451083 565 ntBASIC24.91■■□□□ 1.58
CHD2O14647 S100A2-206ENST00000497140 697 ntTSL 2 BASIC24.91■■□□□ 1.58
CHD2O14647 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC24.91■■□□□ 1.58
CHD2O14647 OR7E47P-204ENST00000575924 449 ntBASIC24.91■■□□□ 1.58
CHD2O14647 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC24.91■■□□□ 1.58
CHD2O14647 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
CHD2O14647 AQP6-205ENST00000618286 829 ntTSL 5 BASIC24.91■■□□□ 1.58
CHD2O14647 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC24.91■■□□□ 1.58
CHD2O14647 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHD2O14647 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHD2O14647 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CHD2O14647 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC24.9■■□□□ 1.58
CHD2O14647 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHD2O14647 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC24.9■■□□□ 1.58
CHD2O14647 FUT8-AS1-201ENST00000621019 1521 ntBASIC24.9■■□□□ 1.58
CHD2O14647 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms