Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 TIMM8BP1-201ENST00000452384 211 ntBASIC29.01■■■□□ 2.23
CHD1O14646 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
CHD1O14646 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
CHD1O14646 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC29.01■■■□□ 2.23
CHD1O14646 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC29.01■■■□□ 2.23
CHD1O14646 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC29.01■■■□□ 2.23
CHD1O14646 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
CHD1O14646 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC29■■■□□ 2.23
CHD1O14646 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC29■■■□□ 2.23
CHD1O14646 CYB561-216ENST00000582297 897 ntTSL 3 BASIC29■■■□□ 2.23
CHD1O14646 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC29■■■□□ 2.23
CHD1O14646 AP001059.3-201ENST00000619053 235 ntBASIC29■■■□□ 2.23
CHD1O14646 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC29■■■□□ 2.23
CHD1O14646 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC29■■■□□ 2.23
CHD1O14646 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC29■■■□□ 2.23
CHD1O14646 AC132938.5-201ENST00000624980 1813 ntBASIC29■■■□□ 2.23
CHD1O14646 COX5BP8-201ENST00000416911 349 ntBASIC29■■■□□ 2.23
CHD1O14646 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC29■■■□□ 2.23
CHD1O14646 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC29■■■□□ 2.23
CHD1O14646 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC29■■■□□ 2.23
CHD1O14646 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
CHD1O14646 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
CHD1O14646 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC28.99■■■□□ 2.23
CHD1O14646 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
CHD1O14646 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC28.99■■■□□ 2.23
CHD1O14646 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC28.99■■■□□ 2.23
CHD1O14646 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
CHD1O14646 MYLKP1-201ENST00000509077 1580 ntBASIC28.99■■■□□ 2.23
CHD1O14646 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC28.99■■■□□ 2.23
CHD1O14646 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC28.99■■■□□ 2.23
CHD1O14646 AL390754.1-201ENST00000619088 582 ntBASIC28.99■■■□□ 2.23
CHD1O14646 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC28.99■■■□□ 2.23
CHD1O14646 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC28.99■■■□□ 2.23
CHD1O14646 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
CHD1O14646 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
CHD1O14646 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC28.98■■■□□ 2.23
CHD1O14646 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC28.98■■■□□ 2.23
CHD1O14646 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
CHD1O14646 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC28.98■■■□□ 2.23
CHD1O14646 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
CHD1O14646 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC28.98■■■□□ 2.23
CHD1O14646 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC28.98■■■□□ 2.23
CHD1O14646 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC28.98■■■□□ 2.23
CHD1O14646 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC28.98■■■□□ 2.23
CHD1O14646 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
CHD1O14646 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC28.98■■■□□ 2.23
CHD1O14646 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
CHD1O14646 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
CHD1O14646 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
CHD1O14646 AC132938.6-201ENST00000623828 1655 ntBASIC28.98■■■□□ 2.23
CHD1O14646 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
CHD1O14646 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC28.97■■■□□ 2.23
CHD1O14646 NABP1-203ENST00000409510 843 ntTSL 5 BASIC28.97■■■□□ 2.23
CHD1O14646 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
CHD1O14646 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
CHD1O14646 SLC25A39P2-201ENST00000537614 270 ntBASIC28.97■■■□□ 2.23
CHD1O14646 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC28.97■■■□□ 2.23
CHD1O14646 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC28.97■■■□□ 2.23
CHD1O14646 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC28.97■■■□□ 2.23
CHD1O14646 REXO1L3P-201ENST00000622202 1288 ntBASIC28.97■■■□□ 2.23
CHD1O14646 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC28.97■■■□□ 2.23
CHD1O14646 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC28.97■■■□□ 2.23
CHD1O14646 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
CHD1O14646 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
CHD1O14646 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC28.97■■■□□ 2.23
CHD1O14646 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC28.97■■■□□ 2.23
CHD1O14646 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC28.97■■■□□ 2.23
CHD1O14646 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC28.97■■■□□ 2.23
CHD1O14646 GPS2P2-201ENST00000430745 888 ntBASIC28.97■■■□□ 2.23
CHD1O14646 KLF2P3-201ENST00000451977 1087 ntBASIC28.97■■■□□ 2.23
CHD1O14646 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC28.97■■■□□ 2.23
CHD1O14646 INGX-202ENST00000489074 768 ntBASIC28.97■■■□□ 2.23
CHD1O14646 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC28.97■■■□□ 2.23
CHD1O14646 KRT8P48-201ENST00000515599 1220 ntBASIC28.97■■■□□ 2.23
CHD1O14646 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC28.97■■■□□ 2.23
CHD1O14646 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC28.96■■■□□ 2.23
CHD1O14646 TBC1D3P5-201ENST00000579401 1545 ntBASIC28.96■■■□□ 2.23
CHD1O14646 PALM-208ENST00000592155 2272 ntTSL 4 BASIC28.96■■■□□ 2.23
CHD1O14646 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
CHD1O14646 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
CHD1O14646 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
CHD1O14646 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC28.96■■■□□ 2.23
CHD1O14646 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
CHD1O14646 WRB-204ENST00000398753 699 ntTSL 3 BASIC28.96■■■□□ 2.23
CHD1O14646 RN7SL692P-201ENST00000464677 288 ntBASIC28.96■■■□□ 2.23
CHD1O14646 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
CHD1O14646 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC28.96■■■□□ 2.23
CHD1O14646 AC025048.6-201ENST00000634326 1161 ntBASIC28.96■■■□□ 2.23
CHD1O14646 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
CHD1O14646 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC28.96■■■□□ 2.23
CHD1O14646 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
CHD1O14646 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.23
CHD1O14646 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.23
CHD1O14646 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC28.95■■■□□ 2.23
CHD1O14646 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC28.95■■■□□ 2.23
CHD1O14646 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
CHD1O14646 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC28.95■■■□□ 2.23
CHD1O14646 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
CHD1O14646 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC28.95■■■□□ 2.22
CHD1O14646 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms