Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CFAP99D6REC4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CFAP99D6REC4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.03■□□□□ 0.48
CFAP99D6REC4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.03■□□□□ 0.48
CFAP99D6REC4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CFAP99D6REC4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CFAP99D6REC4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.03■□□□□ 0.48
CFAP99D6REC4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CFAP99D6REC4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CFAP99D6REC4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CFAP99D6REC4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CFAP99D6REC4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CFAP99D6REC4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CFAP99D6REC4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.03■□□□□ 0.48
CFAP99D6REC4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.03■□□□□ 0.48
CFAP99D6REC4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CFAP99D6REC4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.03■□□□□ 0.48
CFAP99D6REC4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.03■□□□□ 0.48
CFAP99D6REC4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.03■□□□□ 0.48
CFAP99D6REC4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CFAP99D6REC4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.03■□□□□ 0.48
CFAP99D6REC4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
CFAP99D6REC4 NTF6B-201ENST00000591913 560 ntBASIC18.03■□□□□ 0.48
CFAP99D6REC4 AL589935.2-201ENST00000616471 1231 ntBASIC18.03■□□□□ 0.48
CFAP99D6REC4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CFAP99D6REC4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CFAP99D6REC4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CFAP99D6REC4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CFAP99D6REC4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CFAP99D6REC4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CFAP99D6REC4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CFAP99D6REC4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.03■□□□□ 0.48
CFAP99D6REC4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.03■□□□□ 0.48
CFAP99D6REC4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CFAP99D6REC4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CFAP99D6REC4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.02■□□□□ 0.48
CFAP99D6REC4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CFAP99D6REC4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CFAP99D6REC4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.02■□□□□ 0.48
CFAP99D6REC4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CFAP99D6REC4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.02■□□□□ 0.48
CFAP99D6REC4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.02■□□□□ 0.48
CFAP99D6REC4 AC087388.1-201ENST00000571370 1112 ntBASIC18.02■□□□□ 0.48
CFAP99D6REC4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.02■□□□□ 0.48
CFAP99D6REC4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.02■□□□□ 0.48
CFAP99D6REC4 AC244517.3-201ENST00000616254 1235 ntBASIC18.02■□□□□ 0.48
CFAP99D6REC4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CFAP99D6REC4 HYMAI.1-201ENST00000620949 238 ntBASIC18.02■□□□□ 0.48
CFAP99D6REC4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CFAP99D6REC4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CFAP99D6REC4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CFAP99D6REC4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CFAP99D6REC4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
CFAP99D6REC4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CFAP99D6REC4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CFAP99D6REC4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CFAP99D6REC4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
CFAP99D6REC4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.02■□□□□ 0.47
CFAP99D6REC4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CFAP99D6REC4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CFAP99D6REC4 LINC01126-201ENST00000623515 1646 ntBASIC18.01■□□□□ 0.47
CFAP99D6REC4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.01■□□□□ 0.47
CFAP99D6REC4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.01■□□□□ 0.47
CFAP99D6REC4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CFAP99D6REC4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CFAP99D6REC4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CFAP99D6REC4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CFAP99D6REC4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CFAP99D6REC4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CFAP99D6REC4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CFAP99D6REC4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CFAP99D6REC4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.01■□□□□ 0.47
CFAP99D6REC4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.01■□□□□ 0.47
CFAP99D6REC4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.01■□□□□ 0.47
CFAP99D6REC4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.01■□□□□ 0.47
CFAP99D6REC4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.01■□□□□ 0.47
CFAP99D6REC4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.01■□□□□ 0.47
CFAP99D6REC4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.01■□□□□ 0.47
CFAP99D6REC4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CFAP99D6REC4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.01■□□□□ 0.47
CFAP99D6REC4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.01■□□□□ 0.47
CFAP99D6REC4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CFAP99D6REC4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CFAP99D6REC4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CFAP99D6REC4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.01■□□□□ 0.47
CFAP99D6REC4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CFAP99D6REC4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.01■□□□□ 0.47
CFAP99D6REC4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.01■□□□□ 0.47
CFAP99D6REC4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CFAP99D6REC4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CFAP99D6REC4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18■□□□□ 0.47
CFAP99D6REC4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CFAP99D6REC4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18■□□□□ 0.47
CFAP99D6REC4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18■□□□□ 0.47
CFAP99D6REC4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CFAP99D6REC4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CFAP99D6REC4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CFAP99D6REC4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CFAP99D6REC4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CFAP99D6REC4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms