Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RCCD1A6NED2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RCCD1A6NED2 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RCCD1A6NED2 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RCCD1A6NED2 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RCCD1A6NED2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.21■□□□□ 0.67
RCCD1A6NED2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.21■□□□□ 0.67
RCCD1A6NED2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.21■□□□□ 0.67
RCCD1A6NED2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RCCD1A6NED2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RCCD1A6NED2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RCCD1A6NED2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RCCD1A6NED2 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RCCD1A6NED2 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
RCCD1A6NED2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RCCD1A6NED2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RCCD1A6NED2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RCCD1A6NED2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.2■□□□□ 0.66
RCCD1A6NED2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.2■□□□□ 0.66
RCCD1A6NED2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RCCD1A6NED2 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RCCD1A6NED2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RCCD1A6NED2 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RCCD1A6NED2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RCCD1A6NED2 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.2■□□□□ 0.66
RCCD1A6NED2 AL355355.2-201ENST00000442321 338 ntBASIC19.2■□□□□ 0.66
RCCD1A6NED2 TSPY17P-201ENST00000450329 467 ntBASIC19.2■□□□□ 0.66
RCCD1A6NED2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.2■□□□□ 0.66
RCCD1A6NED2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.2■□□□□ 0.66
RCCD1A6NED2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.2■□□□□ 0.66
RCCD1A6NED2 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.2■□□□□ 0.66
RCCD1A6NED2 MIR3180-4-201ENST00000582223 153 ntBASIC19.2■□□□□ 0.66
RCCD1A6NED2 AC010240.3-201ENST00000607688 395 ntBASIC19.2■□□□□ 0.66
RCCD1A6NED2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RCCD1A6NED2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
RCCD1A6NED2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.2■□□□□ 0.66
RCCD1A6NED2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.2■□□□□ 0.66
RCCD1A6NED2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RCCD1A6NED2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
RCCD1A6NED2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.2■□□□□ 0.66
RCCD1A6NED2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RCCD1A6NED2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RCCD1A6NED2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
RCCD1A6NED2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RCCD1A6NED2 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RCCD1A6NED2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RCCD1A6NED2 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.19■□□□□ 0.66
RCCD1A6NED2 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RCCD1A6NED2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RCCD1A6NED2 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RCCD1A6NED2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RCCD1A6NED2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RCCD1A6NED2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RCCD1A6NED2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RCCD1A6NED2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
RCCD1A6NED2 RBM17P1-201ENST00000453646 1190 ntBASIC19.19■□□□□ 0.66
RCCD1A6NED2 FAM201B-201ENST00000458407 597 ntBASIC19.19■□□□□ 0.66
RCCD1A6NED2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RCCD1A6NED2 AP003071.4-201ENST00000562276 1284 ntBASIC19.19■□□□□ 0.66
RCCD1A6NED2 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.19■□□□□ 0.66
RCCD1A6NED2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.19■□□□□ 0.66
RCCD1A6NED2 Z99916.2-201ENST00000604037 246 ntBASIC19.19■□□□□ 0.66
RCCD1A6NED2 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.19■□□□□ 0.66
RCCD1A6NED2 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RCCD1A6NED2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RCCD1A6NED2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.19■□□□□ 0.66
RCCD1A6NED2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RCCD1A6NED2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.19■□□□□ 0.66
RCCD1A6NED2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.19■□□□□ 0.66
RCCD1A6NED2 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
RCCD1A6NED2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
RCCD1A6NED2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.19■□□□□ 0.66
RCCD1A6NED2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.19■□□□□ 0.66
RCCD1A6NED2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
RCCD1A6NED2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RCCD1A6NED2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RCCD1A6NED2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RCCD1A6NED2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RCCD1A6NED2 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.18■□□□□ 0.66
RCCD1A6NED2 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RCCD1A6NED2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RCCD1A6NED2 LINC00167-201ENST00000530583 1419 ntBASIC19.18■□□□□ 0.66
RCCD1A6NED2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.18■□□□□ 0.66
RCCD1A6NED2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RCCD1A6NED2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RCCD1A6NED2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RCCD1A6NED2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
RCCD1A6NED2 AL390955.1-201ENST00000428694 934 ntBASIC19.18■□□□□ 0.66
RCCD1A6NED2 AC007663.1-201ENST00000438948 1240 ntBASIC19.18■□□□□ 0.66
RCCD1A6NED2 GCSHP5-201ENST00000443090 522 ntBASIC19.18■□□□□ 0.66
RCCD1A6NED2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RCCD1A6NED2 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.18■□□□□ 0.66
RCCD1A6NED2 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RCCD1A6NED2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.18■□□□□ 0.66
RCCD1A6NED2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.18■□□□□ 0.66
RCCD1A6NED2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RCCD1A6NED2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.18■□□□□ 0.66
RCCD1A6NED2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RCCD1A6NED2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RCCD1A6NED2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms