Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC24.35■■□□□ 1.49
SBNO1A3KN83 SNHG9-202ENST00000564014 471 ntBASIC24.35■■□□□ 1.49
SBNO1A3KN83 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC24.35■■□□□ 1.49
SBNO1A3KN83 AL589182.2-201ENST00000619332 1049 ntBASIC24.35■■□□□ 1.49
SBNO1A3KN83 AC092865.6-201ENST00000642101 219 ntBASIC24.35■■□□□ 1.49
SBNO1A3KN83 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SBNO1A3KN83 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SBNO1A3KN83 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SBNO1A3KN83 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC24.35■■□□□ 1.49
SBNO1A3KN83 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC24.35■■□□□ 1.49
SBNO1A3KN83 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SBNO1A3KN83 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
SBNO1A3KN83 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SBNO1A3KN83 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC24.34■■□□□ 1.49
SBNO1A3KN83 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC24.34■■□□□ 1.49
SBNO1A3KN83 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SBNO1A3KN83 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC24.34■■□□□ 1.49
SBNO1A3KN83 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SBNO1A3KN83 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SBNO1A3KN83 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC24.34■■□□□ 1.49
SBNO1A3KN83 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SBNO1A3KN83 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
SBNO1A3KN83 ELK2BP-201ENST00000415014 1224 ntBASIC24.34■■□□□ 1.49
SBNO1A3KN83 MKNK2P1-201ENST00000437526 628 ntBASIC24.34■■□□□ 1.49
SBNO1A3KN83 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC24.34■■□□□ 1.49
SBNO1A3KN83 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
SBNO1A3KN83 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC24.34■■□□□ 1.49
SBNO1A3KN83 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SBNO1A3KN83 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
SBNO1A3KN83 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SBNO1A3KN83 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
SBNO1A3KN83 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SBNO1A3KN83 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
SBNO1A3KN83 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC24.33■■□□□ 1.49
SBNO1A3KN83 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
SBNO1A3KN83 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SBNO1A3KN83 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC24.33■■□□□ 1.49
SBNO1A3KN83 HTR5BP-201ENST00000430851 1154 ntBASIC24.33■■□□□ 1.49
SBNO1A3KN83 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC24.33■■□□□ 1.49
SBNO1A3KN83 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SBNO1A3KN83 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC24.33■■□□□ 1.49
SBNO1A3KN83 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC24.33■■□□□ 1.49
SBNO1A3KN83 AC004706.3-202ENST00000621574 984 ntBASIC24.33■■□□□ 1.49
SBNO1A3KN83 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC24.33■■□□□ 1.49
SBNO1A3KN83 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SBNO1A3KN83 ANO7L1-203ENST00000602586 1720 ntBASIC24.33■■□□□ 1.49
SBNO1A3KN83 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC24.33■■□□□ 1.49
SBNO1A3KN83 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SBNO1A3KN83 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SBNO1A3KN83 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SBNO1A3KN83 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SBNO1A3KN83 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC24.33■■□□□ 1.49
SBNO1A3KN83 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
SBNO1A3KN83 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
SBNO1A3KN83 PKD1P6-201ENST00000343738 4769 ntBASIC24.33■■□□□ 1.48
SBNO1A3KN83 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SBNO1A3KN83 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
SBNO1A3KN83 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SBNO1A3KN83 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SBNO1A3KN83 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC24.32■■□□□ 1.48
SBNO1A3KN83 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC24.32■■□□□ 1.48
SBNO1A3KN83 CNN2P11-201ENST00000429351 262 ntBASIC24.32■■□□□ 1.48
SBNO1A3KN83 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SBNO1A3KN83 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
SBNO1A3KN83 AC010460.3-201ENST00000511359 1579 ntBASIC24.32■■□□□ 1.48
SBNO1A3KN83 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC24.32■■□□□ 1.48
SBNO1A3KN83 TBC1D3P5-201ENST00000579401 1545 ntBASIC24.32■■□□□ 1.48
SBNO1A3KN83 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
SBNO1A3KN83 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC24.32■■□□□ 1.48
SBNO1A3KN83 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
SBNO1A3KN83 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
SBNO1A3KN83 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
SBNO1A3KN83 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC24.31■■□□□ 1.48
SBNO1A3KN83 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
SBNO1A3KN83 METTL26-205ENST00000397666 726 ntTSL 2 BASIC24.31■■□□□ 1.48
SBNO1A3KN83 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SBNO1A3KN83 AL645939.2-201ENST00000427340 991 ntBASIC24.31■■□□□ 1.48
SBNO1A3KN83 HCG4B-203ENST00000450128 991 ntBASIC24.31■■□□□ 1.48
SBNO1A3KN83 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC24.31■■□□□ 1.48
SBNO1A3KN83 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC24.31■■□□□ 1.48
SBNO1A3KN83 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC24.31■■□□□ 1.48
SBNO1A3KN83 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC24.31■■□□□ 1.48
SBNO1A3KN83 AC004817.3-201ENST00000602957 2129 ntBASIC24.31■■□□□ 1.48
SBNO1A3KN83 ORC5-208ENST00000626700 344 ntTSL 3 BASIC24.31■■□□□ 1.48
SBNO1A3KN83 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC24.31■■□□□ 1.48
SBNO1A3KN83 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SBNO1A3KN83 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
SBNO1A3KN83 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC24.31■■□□□ 1.48
SBNO1A3KN83 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
SBNO1A3KN83 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
SBNO1A3KN83 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC24.31■■□□□ 1.48
SBNO1A3KN83 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SBNO1A3KN83 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
SBNO1A3KN83 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
SBNO1A3KN83 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SBNO1A3KN83 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SBNO1A3KN83 AC108073.2-201ENST00000464002 357 ntBASIC24.3■■□□□ 1.48
SBNO1A3KN83 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC24.3■■□□□ 1.48
SBNO1A3KN83 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC24.3■■□□□ 1.48
SBNO1A3KN83 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms