Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
CYP46A1Q9Y6A2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
CYP46A1Q9Y6A2 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
CYP46A1Q9Y6A2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CYP46A1Q9Y6A2 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 LIN28AP1-201ENST00000429574 405 ntBASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 AC010203.1-204ENST00000548782 407 ntBASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 AL023973.1-201ENST00000624619 620 ntBASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 AC006116.8-202ENST00000587620 1550 ntBASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.47■■□□□ 1.03
CYP46A1Q9Y6A2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CYP46A1Q9Y6A2 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CYP46A1Q9Y6A2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CYP46A1Q9Y6A2 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CYP46A1Q9Y6A2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CYP46A1Q9Y6A2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CYP46A1Q9Y6A2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CYP46A1Q9Y6A2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
CYP46A1Q9Y6A2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CYP46A1Q9Y6A2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.46■■□□□ 1.03
CYP46A1Q9Y6A2 AC034232.1-201ENST00000506026 1064 ntBASIC21.46■■□□□ 1.03
CYP46A1Q9Y6A2 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.46■■□□□ 1.03
CYP46A1Q9Y6A2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.46■■□□□ 1.03
CYP46A1Q9Y6A2 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.46■■□□□ 1.03
CYP46A1Q9Y6A2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CYP46A1Q9Y6A2 AC140113.3-201ENST00000605663 199 ntBASIC21.46■■□□□ 1.03
CYP46A1Q9Y6A2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.46■■□□□ 1.03
CYP46A1Q9Y6A2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC21.46■■□□□ 1.03
CYP46A1Q9Y6A2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CYP46A1Q9Y6A2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.46■■□□□ 1.03
CYP46A1Q9Y6A2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CYP46A1Q9Y6A2 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CYP46A1Q9Y6A2 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CYP46A1Q9Y6A2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CYP46A1Q9Y6A2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CYP46A1Q9Y6A2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CYP46A1Q9Y6A2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.45■■□□□ 1.02
CYP46A1Q9Y6A2 ATP5G1P1-201ENST00000448724 379 ntBASIC21.45■■□□□ 1.02
CYP46A1Q9Y6A2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CYP46A1Q9Y6A2 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.45■■□□□ 1.02
CYP46A1Q9Y6A2 AC133561.5-201ENST00000635547 218 ntBASIC21.45■■□□□ 1.02
CYP46A1Q9Y6A2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
CYP46A1Q9Y6A2 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.45■■□□□ 1.02
CYP46A1Q9Y6A2 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CYP46A1Q9Y6A2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CYP46A1Q9Y6A2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CYP46A1Q9Y6A2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CYP46A1Q9Y6A2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CYP46A1Q9Y6A2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CYP46A1Q9Y6A2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CYP46A1Q9Y6A2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CYP46A1Q9Y6A2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CYP46A1Q9Y6A2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CYP46A1Q9Y6A2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CYP46A1Q9Y6A2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CYP46A1Q9Y6A2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CYP46A1Q9Y6A2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CYP46A1Q9Y6A2 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CYP46A1Q9Y6A2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CYP46A1Q9Y6A2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.44■■□□□ 1.02
CYP46A1Q9Y6A2 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CYP46A1Q9Y6A2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CYP46A1Q9Y6A2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
CYP46A1Q9Y6A2 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CYP46A1Q9Y6A2 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CYP46A1Q9Y6A2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.44■■□□□ 1.02
CYP46A1Q9Y6A2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CYP46A1Q9Y6A2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CYP46A1Q9Y6A2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CYP46A1Q9Y6A2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CYP46A1Q9Y6A2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CYP46A1Q9Y6A2 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CYP46A1Q9Y6A2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.44■■□□□ 1.02
CYP46A1Q9Y6A2 LINC00167-201ENST00000530583 1419 ntBASIC21.44■■□□□ 1.02
CYP46A1Q9Y6A2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CYP46A1Q9Y6A2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms