Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.06■□□□□ 0.32
RNF6Q9Y252 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF6Q9Y252 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF6Q9Y252 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF6Q9Y252 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF6Q9Y252 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RNF6Q9Y252 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF6Q9Y252 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.06■□□□□ 0.32
RNF6Q9Y252 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF6Q9Y252 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF6Q9Y252 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
RNF6Q9Y252 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF6Q9Y252 AC093677.2-201ENST00000600169 1863 ntBASIC17.05■□□□□ 0.32
RNF6Q9Y252 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF6Q9Y252 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF6Q9Y252 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF6Q9Y252 AC138028.4-201ENST00000564984 1845 ntBASIC17.05■□□□□ 0.32
RNF6Q9Y252 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF6Q9Y252 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF6Q9Y252 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF6Q9Y252 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF6Q9Y252 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF6Q9Y252 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
RNF6Q9Y252 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
RNF6Q9Y252 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF6Q9Y252 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF6Q9Y252 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF6Q9Y252 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF6Q9Y252 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF6Q9Y252 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RNF6Q9Y252 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.05■□□□□ 0.32
RNF6Q9Y252 CKBP1-201ENST00000565489 1086 ntBASIC17.05■□□□□ 0.32
RNF6Q9Y252 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF6Q9Y252 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.05■□□□□ 0.32
RNF6Q9Y252 AC140113.3-201ENST00000605663 199 ntBASIC17.05■□□□□ 0.32
RNF6Q9Y252 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF6Q9Y252 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RNF6Q9Y252 AP000550.4-202ENST00000639755 178 ntBASIC17.05■□□□□ 0.32
RNF6Q9Y252 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF6Q9Y252 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RNF6Q9Y252 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
RNF6Q9Y252 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF6Q9Y252 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF6Q9Y252 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF6Q9Y252 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RNF6Q9Y252 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF6Q9Y252 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RNF6Q9Y252 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF6Q9Y252 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF6Q9Y252 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF6Q9Y252 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF6Q9Y252 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RNF6Q9Y252 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RNF6Q9Y252 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF6Q9Y252 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
RNF6Q9Y252 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RNF6Q9Y252 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.04■□□□□ 0.32
RNF6Q9Y252 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF6Q9Y252 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.04■□□□□ 0.32
RNF6Q9Y252 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF6Q9Y252 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF6Q9Y252 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF6Q9Y252 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF6Q9Y252 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF6Q9Y252 HOMER2P1-201ENST00000455653 964 ntBASIC17.04■□□□□ 0.32
RNF6Q9Y252 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.04■□□□□ 0.32
RNF6Q9Y252 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF6Q9Y252 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.04■□□□□ 0.32
RNF6Q9Y252 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF6Q9Y252 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF6Q9Y252 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.04■□□□□ 0.32
RNF6Q9Y252 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.04■□□□□ 0.32
RNF6Q9Y252 KRT8P41-201ENST00000533985 1514 ntBASIC17.04■□□□□ 0.32
RNF6Q9Y252 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.04■□□□□ 0.32
RNF6Q9Y252 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF6Q9Y252 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.04■□□□□ 0.32
RNF6Q9Y252 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF6Q9Y252 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF6Q9Y252 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF6Q9Y252 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF6Q9Y252 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF6Q9Y252 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF6Q9Y252 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF6Q9Y252 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF6Q9Y252 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RNF6Q9Y252 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF6Q9Y252 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RNF6Q9Y252 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
RNF6Q9Y252 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
RNF6Q9Y252 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF6Q9Y252 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.03■□□□□ 0.32
RNF6Q9Y252 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF6Q9Y252 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF6Q9Y252 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.03■□□□□ 0.32
RNF6Q9Y252 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RNF6Q9Y252 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF6Q9Y252 AP003041.3-201ENST00000527151 707 ntBASIC17.03■□□□□ 0.32
RNF6Q9Y252 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF6Q9Y252 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF6Q9Y252 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms