Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.77■□□□□ 0.92
PNMA3Q9UL41 LAGE3P1-201ENST00000425356 484 ntBASIC20.77■□□□□ 0.92
PNMA3Q9UL41 GPX1P2-201ENST00000429271 606 ntBASIC20.77■□□□□ 0.92
PNMA3Q9UL41 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.77■□□□□ 0.92
PNMA3Q9UL41 RNA5SP416-201ENST00000516838 111 ntBASIC20.77■□□□□ 0.92
PNMA3Q9UL41 AC055717.3-201ENST00000622967 595 ntBASIC20.77■□□□□ 0.92
PNMA3Q9UL41 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PNMA3Q9UL41 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PNMA3Q9UL41 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PNMA3Q9UL41 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PNMA3Q9UL41 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PNMA3Q9UL41 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
PNMA3Q9UL41 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PNMA3Q9UL41 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
PNMA3Q9UL41 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
PNMA3Q9UL41 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.76■□□□□ 0.91
PNMA3Q9UL41 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PNMA3Q9UL41 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.76■□□□□ 0.91
PNMA3Q9UL41 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PNMA3Q9UL41 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PNMA3Q9UL41 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PNMA3Q9UL41 RPSAP43-201ENST00000402237 625 ntBASIC20.76■□□□□ 0.91
PNMA3Q9UL41 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.76■□□□□ 0.91
PNMA3Q9UL41 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
PNMA3Q9UL41 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.76■□□□□ 0.91
PNMA3Q9UL41 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.76■□□□□ 0.91
PNMA3Q9UL41 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.76■□□□□ 0.91
PNMA3Q9UL41 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PNMA3Q9UL41 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PNMA3Q9UL41 AC079781.4-201ENST00000641908 219 ntBASIC20.76■□□□□ 0.91
PNMA3Q9UL41 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PNMA3Q9UL41 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PNMA3Q9UL41 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PNMA3Q9UL41 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PNMA3Q9UL41 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.76■□□□□ 0.91
PNMA3Q9UL41 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PNMA3Q9UL41 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.76■□□□□ 0.91
PNMA3Q9UL41 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PNMA3Q9UL41 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PNMA3Q9UL41 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
PNMA3Q9UL41 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PNMA3Q9UL41 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PNMA3Q9UL41 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PNMA3Q9UL41 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PNMA3Q9UL41 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.75■□□□□ 0.91
PNMA3Q9UL41 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.75■□□□□ 0.91
PNMA3Q9UL41 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PNMA3Q9UL41 YBX2P1-201ENST00000394192 760 ntBASIC20.75■□□□□ 0.91
PNMA3Q9UL41 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.75■□□□□ 0.91
PNMA3Q9UL41 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.75■□□□□ 0.91
PNMA3Q9UL41 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.75■□□□□ 0.91
PNMA3Q9UL41 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.75■□□□□ 0.91
PNMA3Q9UL41 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.75■□□□□ 0.91
PNMA3Q9UL41 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.75■□□□□ 0.91
PNMA3Q9UL41 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.75■□□□□ 0.91
PNMA3Q9UL41 AP000867.4-201ENST00000641616 219 ntBASIC20.75■□□□□ 0.91
PNMA3Q9UL41 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PNMA3Q9UL41 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.75■□□□□ 0.91
PNMA3Q9UL41 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PNMA3Q9UL41 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PNMA3Q9UL41 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PNMA3Q9UL41 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.75■□□□□ 0.91
PNMA3Q9UL41 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PNMA3Q9UL41 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.74■□□□□ 0.91
PNMA3Q9UL41 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PNMA3Q9UL41 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PNMA3Q9UL41 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PNMA3Q9UL41 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PNMA3Q9UL41 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PNMA3Q9UL41 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
PNMA3Q9UL41 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PNMA3Q9UL41 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PNMA3Q9UL41 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PNMA3Q9UL41 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PNMA3Q9UL41 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.74■□□□□ 0.91
PNMA3Q9UL41 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PNMA3Q9UL41 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.74■□□□□ 0.91
PNMA3Q9UL41 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.74■□□□□ 0.91
PNMA3Q9UL41 UNC93B6-202ENST00000528242 690 ntBASIC20.74■□□□□ 0.91
PNMA3Q9UL41 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PNMA3Q9UL41 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.74■□□□□ 0.91
PNMA3Q9UL41 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PNMA3Q9UL41 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PNMA3Q9UL41 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.74■□□□□ 0.91
PNMA3Q9UL41 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.74■□□□□ 0.91
PNMA3Q9UL41 AL049812.1-201ENST00000432563 2267 ntBASIC20.74■□□□□ 0.91
PNMA3Q9UL41 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
PNMA3Q9UL41 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
PNMA3Q9UL41 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PNMA3Q9UL41 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PNMA3Q9UL41 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PNMA3Q9UL41 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PNMA3Q9UL41 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PNMA3Q9UL41 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.73■□□□□ 0.91
PNMA3Q9UL41 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PNMA3Q9UL41 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PNMA3Q9UL41 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PNMA3Q9UL41 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PNMA3Q9UL41 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.73■□□□□ 0.91
PNMA3Q9UL41 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms