Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 AL121672.3-201ENST00000608644 468 ntBASIC19.47■□□□□ 0.71
GTF3C4Q9UKN8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
GTF3C4Q9UKN8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GTF3C4Q9UKN8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
GTF3C4Q9UKN8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
GTF3C4Q9UKN8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.47■□□□□ 0.71
GTF3C4Q9UKN8 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GTF3C4Q9UKN8 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GTF3C4Q9UKN8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.47■□□□□ 0.71
GTF3C4Q9UKN8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GTF3C4Q9UKN8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GTF3C4Q9UKN8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GTF3C4Q9UKN8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GTF3C4Q9UKN8 AC005332.8-201ENST00000622750 2735 ntBASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 TSSC2-201ENST00000450217 709 ntBASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 KRT8P26-201ENST00000534154 1276 ntBASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 NPAP1P7-201ENST00000613027 823 ntBASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GTF3C4Q9UKN8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GTF3C4Q9UKN8 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
GTF3C4Q9UKN8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GTF3C4Q9UKN8 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GTF3C4Q9UKN8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
GTF3C4Q9UKN8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GTF3C4Q9UKN8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.45■□□□□ 0.7
GTF3C4Q9UKN8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
GTF3C4Q9UKN8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
GTF3C4Q9UKN8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GTF3C4Q9UKN8 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GTF3C4Q9UKN8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
GTF3C4Q9UKN8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GTF3C4Q9UKN8 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GTF3C4Q9UKN8 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GTF3C4Q9UKN8 ATP5G2P1-201ENST00000433580 426 ntBASIC19.45■□□□□ 0.7
GTF3C4Q9UKN8 HCG4P8-203ENST00000443049 980 ntBASIC19.45■□□□□ 0.7
GTF3C4Q9UKN8 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.45■□□□□ 0.7
GTF3C4Q9UKN8 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
GTF3C4Q9UKN8 KRT18P56-201ENST00000507275 550 ntBASIC19.45■□□□□ 0.7
GTF3C4Q9UKN8 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GTF3C4Q9UKN8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
GTF3C4Q9UKN8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GTF3C4Q9UKN8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GTF3C4Q9UKN8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GTF3C4Q9UKN8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GTF3C4Q9UKN8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.45■□□□□ 0.7
GTF3C4Q9UKN8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GTF3C4Q9UKN8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF3C4Q9UKN8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF3C4Q9UKN8 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.44■□□□□ 0.7
GTF3C4Q9UKN8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF3C4Q9UKN8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.44■□□□□ 0.7
GTF3C4Q9UKN8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF3C4Q9UKN8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF3C4Q9UKN8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.44■□□□□ 0.7
GTF3C4Q9UKN8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF3C4Q9UKN8 SLC25A6P5-201ENST00000435663 894 ntBASIC19.44■□□□□ 0.7
GTF3C4Q9UKN8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.44■□□□□ 0.7
GTF3C4Q9UKN8 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.44■□□□□ 0.7
GTF3C4Q9UKN8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.44■□□□□ 0.7
GTF3C4Q9UKN8 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.44■□□□□ 0.7
GTF3C4Q9UKN8 AC092119.3-201ENST00000612618 583 ntBASIC19.44■□□□□ 0.7
GTF3C4Q9UKN8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF3C4Q9UKN8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.44■□□□□ 0.7
GTF3C4Q9UKN8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
GTF3C4Q9UKN8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
GTF3C4Q9UKN8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF3C4Q9UKN8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF3C4Q9UKN8 AL096828.2-201ENST00000567259 1965 ntBASIC19.44■□□□□ 0.7
GTF3C4Q9UKN8 PHGDH-209ENST00000641074 1780 ntBASIC19.44■□□□□ 0.7
GTF3C4Q9UKN8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
GTF3C4Q9UKN8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms