Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC010460.3-201ENST00000511359 1579 ntBASIC28.51■■■□□ 2.15
RIMBP3Q9UFD9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
RIMBP3Q9UFD9 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
RIMBP3Q9UFD9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
RIMBP3Q9UFD9 AC069120.2-201ENST00000524091 540 ntBASIC28.51■■■□□ 2.15
RIMBP3Q9UFD9 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC28.51■■■□□ 2.15
RIMBP3Q9UFD9 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC28.5■■■□□ 2.15
RIMBP3Q9UFD9 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
RIMBP3Q9UFD9 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
RIMBP3Q9UFD9 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
RIMBP3Q9UFD9 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
RIMBP3Q9UFD9 AL020989.1-201ENST00000422979 469 ntBASIC28.5■■■□□ 2.15
RIMBP3Q9UFD9 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC28.5■■■□□ 2.15
RIMBP3Q9UFD9 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC28.5■■■□□ 2.15
RIMBP3Q9UFD9 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC28.5■■■□□ 2.15
RIMBP3Q9UFD9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
RIMBP3Q9UFD9 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC28.49■■■□□ 2.15
RIMBP3Q9UFD9 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
RIMBP3Q9UFD9 AC097493.3-201ENST00000509725 367 ntBASIC28.49■■■□□ 2.15
RIMBP3Q9UFD9 NAA38-206ENST00000576384 424 ntTSL 2 BASIC28.49■■■□□ 2.15
RIMBP3Q9UFD9 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
RIMBP3Q9UFD9 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC28.49■■■□□ 2.15
RIMBP3Q9UFD9 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC28.49■■■□□ 2.15
RIMBP3Q9UFD9 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
RIMBP3Q9UFD9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
RIMBP3Q9UFD9 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
RIMBP3Q9UFD9 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
RIMBP3Q9UFD9 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
RIMBP3Q9UFD9 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
RIMBP3Q9UFD9 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC28.48■■■□□ 2.15
RIMBP3Q9UFD9 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
RIMBP3Q9UFD9 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC28.48■■■□□ 2.15
RIMBP3Q9UFD9 MIR6805-201ENST00000615055 62 ntBASIC28.48■■■□□ 2.15
RIMBP3Q9UFD9 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC28.48■■■□□ 2.15
RIMBP3Q9UFD9 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
RIMBP3Q9UFD9 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC28.48■■■□□ 2.15
RIMBP3Q9UFD9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
RIMBP3Q9UFD9 AC020907.5-201ENST00000624372 1936 ntBASIC28.48■■■□□ 2.15
RIMBP3Q9UFD9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC28.48■■■□□ 2.15
RIMBP3Q9UFD9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
RIMBP3Q9UFD9 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC28.48■■■□□ 2.15
RIMBP3Q9UFD9 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC28.48■■■□□ 2.15
RIMBP3Q9UFD9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
RIMBP3Q9UFD9 AC008677.1-201ENST00000519230 1561 ntBASIC28.47■■■□□ 2.15
RIMBP3Q9UFD9 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC28.47■■■□□ 2.15
RIMBP3Q9UFD9 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC28.47■■■□□ 2.15
RIMBP3Q9UFD9 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC28.47■■■□□ 2.15
RIMBP3Q9UFD9 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
RIMBP3Q9UFD9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
RIMBP3Q9UFD9 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
RIMBP3Q9UFD9 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
RIMBP3Q9UFD9 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
RIMBP3Q9UFD9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
RIMBP3Q9UFD9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC28.47■■■□□ 2.15
RIMBP3Q9UFD9 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC28.47■■■□□ 2.15
RIMBP3Q9UFD9 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC28.47■■■□□ 2.15
RIMBP3Q9UFD9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
RIMBP3Q9UFD9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC28.47■■■□□ 2.15
RIMBP3Q9UFD9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
RIMBP3Q9UFD9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
RIMBP3Q9UFD9 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
RIMBP3Q9UFD9 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC28.46■■■□□ 2.15
RIMBP3Q9UFD9 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC28.46■■■□□ 2.15
RIMBP3Q9UFD9 SPDYE14P-201ENST00000442619 822 ntBASIC28.46■■■□□ 2.15
RIMBP3Q9UFD9 CXCL1P1-201ENST00000502804 216 ntBASIC28.46■■■□□ 2.15
RIMBP3Q9UFD9 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
RIMBP3Q9UFD9 CYB561-216ENST00000582297 897 ntTSL 3 BASIC28.46■■■□□ 2.15
RIMBP3Q9UFD9 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC28.46■■■□□ 2.15
RIMBP3Q9UFD9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
RIMBP3Q9UFD9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
RIMBP3Q9UFD9 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.14
RIMBP3Q9UFD9 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
RIMBP3Q9UFD9 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC28.45■■■□□ 2.14
RIMBP3Q9UFD9 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC28.45■■■□□ 2.14
RIMBP3Q9UFD9 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC28.45■■■□□ 2.14
RIMBP3Q9UFD9 AL592309.1-201ENST00000443127 649 ntBASIC28.45■■■□□ 2.14
RIMBP3Q9UFD9 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC28.45■■■□□ 2.14
RIMBP3Q9UFD9 BSG-214ENST00000614867 960 ntTSL 3 BASIC28.45■■■□□ 2.14
RIMBP3Q9UFD9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.14
RIMBP3Q9UFD9 GID4-202ENST00000376345 1391 ntTSL 3 BASIC28.45■■■□□ 2.14
RIMBP3Q9UFD9 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
RIMBP3Q9UFD9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC28.45■■■□□ 2.14
RIMBP3Q9UFD9 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
RIMBP3Q9UFD9 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC28.44■■■□□ 2.14
RIMBP3Q9UFD9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
RIMBP3Q9UFD9 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
RIMBP3Q9UFD9 AC079140.1-201ENST00000508039 487 ntBASIC28.44■■■□□ 2.14
RIMBP3Q9UFD9 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
RIMBP3Q9UFD9 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC28.44■■■□□ 2.14
RIMBP3Q9UFD9 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
RIMBP3Q9UFD9 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
RIMBP3Q9UFD9 GGTLC5P-201ENST00000617623 998 ntBASIC28.44■■■□□ 2.14
RIMBP3Q9UFD9 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC28.44■■■□□ 2.14
RIMBP3Q9UFD9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
RIMBP3Q9UFD9 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
RIMBP3Q9UFD9 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC28.44■■■□□ 2.14
RIMBP3Q9UFD9 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC28.44■■■□□ 2.14
RIMBP3Q9UFD9 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
RIMBP3Q9UFD9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC28.44■■■□□ 2.14
RIMBP3Q9UFD9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms