Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VAPAQ9P0L0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VAPAQ9P0L0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
VAPAQ9P0L0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VAPAQ9P0L0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
VAPAQ9P0L0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VAPAQ9P0L0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
VAPAQ9P0L0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.11■□□□□ 0.33
VAPAQ9P0L0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.11■□□□□ 0.33
VAPAQ9P0L0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.11■□□□□ 0.33
VAPAQ9P0L0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.11■□□□□ 0.33
VAPAQ9P0L0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.11■□□□□ 0.33
VAPAQ9P0L0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VAPAQ9P0L0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VAPAQ9P0L0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
VAPAQ9P0L0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VAPAQ9P0L0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VAPAQ9P0L0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
VAPAQ9P0L0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 AL023806.1-201ENST00000603994 1649 ntBASIC17.1■□□□□ 0.33
VAPAQ9P0L0 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 TSPY17P-201ENST00000450329 467 ntBASIC17.1■□□□□ 0.33
VAPAQ9P0L0 TSPY20P-201ENST00000450910 630 ntBASIC17.1■□□□□ 0.33
VAPAQ9P0L0 AC098590.1-201ENST00000468126 897 ntBASIC17.1■□□□□ 0.33
VAPAQ9P0L0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 DUTP2-201ENST00000519164 463 ntBASIC17.1■□□□□ 0.33
VAPAQ9P0L0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 MIR3180-4-201ENST00000582223 153 ntBASIC17.1■□□□□ 0.33
VAPAQ9P0L0 AP001412.1-201ENST00000608405 714 ntBASIC17.1■□□□□ 0.33
VAPAQ9P0L0 AC026471.5-201ENST00000615068 467 ntBASIC17.1■□□□□ 0.33
VAPAQ9P0L0 AC112497.1-201ENST00000624824 639 ntBASIC17.1■□□□□ 0.33
VAPAQ9P0L0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 AC022211.2-201ENST00000585075 2527 ntBASIC17.1■□□□□ 0.33
VAPAQ9P0L0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAPAQ9P0L0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 AP001094.4-201ENST00000579008 2176 ntBASIC17.09■□□□□ 0.33
VAPAQ9P0L0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
VAPAQ9P0L0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VAPAQ9P0L0 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VAPAQ9P0L0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
VAPAQ9P0L0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms