Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 CLEC4GP1-201ENST00000596555 870 ntBASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 AL023284.2-201ENST00000405850 579 ntBASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 RCC2P3-201ENST00000418112 1537 ntBASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCKIPSDQ9NZQ3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 AC135776.1-201ENST00000319817 2481 ntBASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
NCKIPSDQ9NZQ3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCKIPSDQ9NZQ3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NCKIPSDQ9NZQ3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.29■□□□□ 0.52
NCKIPSDQ9NZQ3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCKIPSDQ9NZQ3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCKIPSDQ9NZQ3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
NCKIPSDQ9NZQ3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NCKIPSDQ9NZQ3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCKIPSDQ9NZQ3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.29■□□□□ 0.52
NCKIPSDQ9NZQ3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NCKIPSDQ9NZQ3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NCKIPSDQ9NZQ3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.29■□□□□ 0.52
NCKIPSDQ9NZQ3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NCKIPSDQ9NZQ3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NCKIPSDQ9NZQ3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.29■□□□□ 0.52
NCKIPSDQ9NZQ3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.29■□□□□ 0.52
NCKIPSDQ9NZQ3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.29■□□□□ 0.52
NCKIPSDQ9NZQ3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.29■□□□□ 0.52
NCKIPSDQ9NZQ3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.29■□□□□ 0.52
NCKIPSDQ9NZQ3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.29■□□□□ 0.52
NCKIPSDQ9NZQ3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
NCKIPSDQ9NZQ3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.29■□□□□ 0.52
NCKIPSDQ9NZQ3 AC024243.1-201ENST00000609234 778 ntBASIC18.29■□□□□ 0.52
NCKIPSDQ9NZQ3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NCKIPSDQ9NZQ3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.29■□□□□ 0.52
NCKIPSDQ9NZQ3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
NCKIPSDQ9NZQ3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NCKIPSDQ9NZQ3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms