Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15□□□□□ -0.01
CALYQ9NYX4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CALYQ9NYX4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15□□□□□ -0.01
CALYQ9NYX4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15□□□□□ -0.01
CALYQ9NYX4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CALYQ9NYX4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CALYQ9NYX4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.99□□□□□ -0.01
CALYQ9NYX4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
CALYQ9NYX4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CALYQ9NYX4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CALYQ9NYX4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CALYQ9NYX4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CALYQ9NYX4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CALYQ9NYX4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CALYQ9NYX4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CALYQ9NYX4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CALYQ9NYX4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CALYQ9NYX4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CALYQ9NYX4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
CALYQ9NYX4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CALYQ9NYX4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.99□□□□□ -0.01
CALYQ9NYX4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CALYQ9NYX4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.99□□□□□ -0.01
CALYQ9NYX4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.99□□□□□ -0.01
CALYQ9NYX4 YBX1P2-201ENST00000489612 999 ntBASIC14.99□□□□□ -0.01
CALYQ9NYX4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CALYQ9NYX4 AC011558.1-201ENST00000623459 338 ntBASIC14.99□□□□□ -0.01
CALYQ9NYX4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CALYQ9NYX4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.99□□□□□ -0.01
CALYQ9NYX4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CALYQ9NYX4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CALYQ9NYX4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.99□□□□□ -0.01
CALYQ9NYX4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CALYQ9NYX4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CALYQ9NYX4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CALYQ9NYX4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CALYQ9NYX4 AC073508.3-201ENST00000619697 1419 ntBASIC14.99□□□□□ -0.01
CALYQ9NYX4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CALYQ9NYX4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CALYQ9NYX4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CALYQ9NYX4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CALYQ9NYX4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CALYQ9NYX4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CALYQ9NYX4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CALYQ9NYX4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CALYQ9NYX4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CALYQ9NYX4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
CALYQ9NYX4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.98□□□□□ -0.01
CALYQ9NYX4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CALYQ9NYX4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.98□□□□□ -0.01
CALYQ9NYX4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CALYQ9NYX4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CALYQ9NYX4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CALYQ9NYX4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CALYQ9NYX4 AC117947.1-201ENST00000427448 529 ntBASIC14.98□□□□□ -0.01
CALYQ9NYX4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
CALYQ9NYX4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.98□□□□□ -0.01
CALYQ9NYX4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CALYQ9NYX4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CALYQ9NYX4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CALYQ9NYX4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.98□□□□□ -0.01
CALYQ9NYX4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.98□□□□□ -0.01
CALYQ9NYX4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CALYQ9NYX4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CALYQ9NYX4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CALYQ9NYX4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CALYQ9NYX4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.98□□□□□ -0.01
CALYQ9NYX4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CALYQ9NYX4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CALYQ9NYX4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CALYQ9NYX4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.97□□□□□ -0.01
CALYQ9NYX4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CALYQ9NYX4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.97□□□□□ -0.01
CALYQ9NYX4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.97□□□□□ -0.01
CALYQ9NYX4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
CALYQ9NYX4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CALYQ9NYX4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.97□□□□□ -0.01
CALYQ9NYX4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CALYQ9NYX4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CALYQ9NYX4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CALYQ9NYX4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CALYQ9NYX4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CALYQ9NYX4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CALYQ9NYX4 SPDYE15P-201ENST00000424157 909 ntBASIC14.97□□□□□ -0.01
CALYQ9NYX4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CALYQ9NYX4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CALYQ9NYX4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.97□□□□□ -0.01
CALYQ9NYX4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.97□□□□□ -0.01
CALYQ9NYX4 AL136038.4-201ENST00000603606 1261 ntBASIC14.97□□□□□ -0.01
CALYQ9NYX4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.97□□□□□ -0.01
CALYQ9NYX4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.97□□□□□ -0.01
CALYQ9NYX4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CALYQ9NYX4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.97□□□□□ -0.01
CALYQ9NYX4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CALYQ9NYX4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CALYQ9NYX4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CALYQ9NYX4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CALYQ9NYX4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.97□□□□□ -0.01
CALYQ9NYX4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
CALYQ9NYX4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms