Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.67■□□□□ 0.58
VPS45Q9NRW7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS45Q9NRW7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS45Q9NRW7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
VPS45Q9NRW7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VPS45Q9NRW7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS45Q9NRW7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
VPS45Q9NRW7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.67■□□□□ 0.58
VPS45Q9NRW7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
VPS45Q9NRW7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VPS45Q9NRW7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS45Q9NRW7 HLA-F-220ENST00000434407 884 ntBASIC18.67■□□□□ 0.58
VPS45Q9NRW7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.67■□□□□ 0.58
VPS45Q9NRW7 FOSL1P1-201ENST00000511041 816 ntBASIC18.67■□□□□ 0.58
VPS45Q9NRW7 SLC25A6P4-201ENST00000586535 553 ntBASIC18.67■□□□□ 0.58
VPS45Q9NRW7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
VPS45Q9NRW7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS45Q9NRW7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS45Q9NRW7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS45Q9NRW7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS45Q9NRW7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
VPS45Q9NRW7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.67■□□□□ 0.58
VPS45Q9NRW7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
VPS45Q9NRW7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS45Q9NRW7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS45Q9NRW7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
VPS45Q9NRW7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS45Q9NRW7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
VPS45Q9NRW7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS45Q9NRW7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS45Q9NRW7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS45Q9NRW7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS45Q9NRW7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS45Q9NRW7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.66■□□□□ 0.58
VPS45Q9NRW7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS45Q9NRW7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
VPS45Q9NRW7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS45Q9NRW7 MIR662-201ENST00000384847 95 ntBASIC18.66■□□□□ 0.58
VPS45Q9NRW7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.66■□□□□ 0.58
VPS45Q9NRW7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
VPS45Q9NRW7 SEC1P-202ENST00000473944 940 ntBASIC18.66■□□□□ 0.58
VPS45Q9NRW7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.66■□□□□ 0.58
VPS45Q9NRW7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.66■□□□□ 0.58
VPS45Q9NRW7 AC117500.6-201ENST00000624871 588 ntBASIC18.66■□□□□ 0.58
VPS45Q9NRW7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
VPS45Q9NRW7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
VPS45Q9NRW7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
VPS45Q9NRW7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS45Q9NRW7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS45Q9NRW7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.66■□□□□ 0.58
VPS45Q9NRW7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS45Q9NRW7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS45Q9NRW7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
VPS45Q9NRW7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS45Q9NRW7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS45Q9NRW7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.65■□□□□ 0.58
VPS45Q9NRW7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VPS45Q9NRW7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.65■□□□□ 0.58
VPS45Q9NRW7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VPS45Q9NRW7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.65■□□□□ 0.58
VPS45Q9NRW7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
VPS45Q9NRW7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS45Q9NRW7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS45Q9NRW7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.65■□□□□ 0.58
VPS45Q9NRW7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
VPS45Q9NRW7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.65■□□□□ 0.58
VPS45Q9NRW7 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.65■□□□□ 0.58
VPS45Q9NRW7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.65■□□□□ 0.58
VPS45Q9NRW7 AC010240.3-201ENST00000607688 395 ntBASIC18.65■□□□□ 0.58
VPS45Q9NRW7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS45Q9NRW7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.65■□□□□ 0.58
VPS45Q9NRW7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VPS45Q9NRW7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
VPS45Q9NRW7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VPS45Q9NRW7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
VPS45Q9NRW7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS45Q9NRW7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS45Q9NRW7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS45Q9NRW7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VPS45Q9NRW7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
VPS45Q9NRW7 SDHAP2-201ENST00000455183 2001 ntBASIC18.64■□□□□ 0.58
VPS45Q9NRW7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS45Q9NRW7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
VPS45Q9NRW7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.64■□□□□ 0.57
VPS45Q9NRW7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS45Q9NRW7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
VPS45Q9NRW7 TOB2P1-201ENST00000469761 992 ntBASIC18.64■□□□□ 0.57
VPS45Q9NRW7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
VPS45Q9NRW7 AL136038.4-201ENST00000603606 1261 ntBASIC18.64■□□□□ 0.57
VPS45Q9NRW7 AC079602.3-201ENST00000623931 403 ntBASIC18.64■□□□□ 0.57
VPS45Q9NRW7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
VPS45Q9NRW7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS45Q9NRW7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS45Q9NRW7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.64■□□□□ 0.57
VPS45Q9NRW7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.64■□□□□ 0.57
VPS45Q9NRW7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS45Q9NRW7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.64■□□□□ 0.57
VPS45Q9NRW7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms