Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 LIN28AP1-201ENST00000429574 405 ntBASIC16.82■□□□□ 0.28
POLE3Q9NRF9 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 AC073912.3-201ENST00000624414 853 ntBASIC16.82■□□□□ 0.28
POLE3Q9NRF9 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLE3Q9NRF9 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 DUTP2-201ENST00000519164 463 ntBASIC16.81■□□□□ 0.28
POLE3Q9NRF9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.81■□□□□ 0.28
POLE3Q9NRF9 AC097493.4-201ENST00000641197 219 ntBASIC16.81■□□□□ 0.28
POLE3Q9NRF9 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
POLE3Q9NRF9 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 ATP5G1P1-201ENST00000448724 379 ntBASIC16.8■□□□□ 0.28
POLE3Q9NRF9 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 AC012306.2-201ENST00000609350 630 ntBASIC16.8■□□□□ 0.28
POLE3Q9NRF9 AL157888.1-201ENST00000631930 593 ntBASIC16.8■□□□□ 0.28
POLE3Q9NRF9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
POLE3Q9NRF9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms