Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMG20AQ9NP66 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HMG20AQ9NP66 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMG20AQ9NP66 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.47■□□□□ 0.23
HMG20AQ9NP66 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMG20AQ9NP66 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMG20AQ9NP66 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HMG20AQ9NP66 AP006587.1-201ENST00000534129 1502 ntBASIC16.47■□□□□ 0.23
HMG20AQ9NP66 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMG20AQ9NP66 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMG20AQ9NP66 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.47■□□□□ 0.23
HMG20AQ9NP66 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.47■□□□□ 0.23
HMG20AQ9NP66 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.47■□□□□ 0.23
HMG20AQ9NP66 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMG20AQ9NP66 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMG20AQ9NP66 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMG20AQ9NP66 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.47■□□□□ 0.23
HMG20AQ9NP66 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMG20AQ9NP66 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.47■□□□□ 0.23
HMG20AQ9NP66 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMG20AQ9NP66 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HMG20AQ9NP66 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.47■□□□□ 0.23
HMG20AQ9NP66 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HMG20AQ9NP66 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMG20AQ9NP66 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HMG20AQ9NP66 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.46■□□□□ 0.23
HMG20AQ9NP66 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 FLJ38576-201ENST00000623820 2459 ntBASIC16.46■□□□□ 0.23
HMG20AQ9NP66 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 SOX15-203ENST00000570788 1093 ntBASIC16.46■□□□□ 0.23
HMG20AQ9NP66 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.46■□□□□ 0.23
HMG20AQ9NP66 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HMG20AQ9NP66 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
HMG20AQ9NP66 PCDHA1-201ENST00000378133 2726 ntBASIC16.46■□□□□ 0.22
HMG20AQ9NP66 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
HMG20AQ9NP66 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HMG20AQ9NP66 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 YBX1P10-201ENST00000444752 975 ntBASIC16.45■□□□□ 0.22
HMG20AQ9NP66 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 MYC-208ENST00000641036 567 ntBASIC16.45■□□□□ 0.22
HMG20AQ9NP66 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMG20AQ9NP66 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms