Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.47■□□□□ 0.07
GCM1Q9NP62 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
GCM1Q9NP62 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.47■□□□□ 0.07
GCM1Q9NP62 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GCM1Q9NP62 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GCM1Q9NP62 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GCM1Q9NP62 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GCM1Q9NP62 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.47■□□□□ 0.07
GCM1Q9NP62 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GCM1Q9NP62 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
GCM1Q9NP62 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
GCM1Q9NP62 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
GCM1Q9NP62 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.46■□□□□ 0.07
GCM1Q9NP62 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
GCM1Q9NP62 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
GCM1Q9NP62 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
GCM1Q9NP62 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.46■□□□□ 0.07
GCM1Q9NP62 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GCM1Q9NP62 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
GCM1Q9NP62 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
GCM1Q9NP62 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.46■□□□□ 0.07
GCM1Q9NP62 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GCM1Q9NP62 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GCM1Q9NP62 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GCM1Q9NP62 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
GCM1Q9NP62 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GCM1Q9NP62 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
GCM1Q9NP62 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GCM1Q9NP62 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
GCM1Q9NP62 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GCM1Q9NP62 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
GCM1Q9NP62 MIR662-201ENST00000384847 95 ntBASIC15.46■□□□□ 0.07
GCM1Q9NP62 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.46■□□□□ 0.07
GCM1Q9NP62 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GCM1Q9NP62 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
GCM1Q9NP62 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
GCM1Q9NP62 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.46■□□□□ 0.07
GCM1Q9NP62 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.46■□□□□ 0.07
GCM1Q9NP62 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.46■□□□□ 0.07
GCM1Q9NP62 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
GCM1Q9NP62 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
GCM1Q9NP62 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.46■□□□□ 0.07
GCM1Q9NP62 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.46■□□□□ 0.07
GCM1Q9NP62 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
GCM1Q9NP62 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.46■□□□□ 0.07
GCM1Q9NP62 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.46■□□□□ 0.07
GCM1Q9NP62 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.46■□□□□ 0.07
GCM1Q9NP62 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GCM1Q9NP62 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GCM1Q9NP62 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
GCM1Q9NP62 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
GCM1Q9NP62 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.46■□□□□ 0.07
GCM1Q9NP62 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.46■□□□□ 0.06
GCM1Q9NP62 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
GCM1Q9NP62 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
GCM1Q9NP62 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
GCM1Q9NP62 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
GCM1Q9NP62 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
GCM1Q9NP62 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
GCM1Q9NP62 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.46■□□□□ 0.06
GCM1Q9NP62 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.46■□□□□ 0.06
GCM1Q9NP62 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
GCM1Q9NP62 OR6D1P-203ENST00000641209 4860 ntBASIC15.45■□□□□ 0.06
GCM1Q9NP62 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
GCM1Q9NP62 AC005332.1-201ENST00000577698 1310 ntBASIC15.45■□□□□ 0.06
GCM1Q9NP62 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GCM1Q9NP62 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GCM1Q9NP62 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GCM1Q9NP62 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GCM1Q9NP62 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
GCM1Q9NP62 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GCM1Q9NP62 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
GCM1Q9NP62 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.45■□□□□ 0.06
GCM1Q9NP62 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
GCM1Q9NP62 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GCM1Q9NP62 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GCM1Q9NP62 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
GCM1Q9NP62 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GCM1Q9NP62 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
GCM1Q9NP62 AL645929.1-201ENST00000420084 975 ntBASIC15.45■□□□□ 0.06
GCM1Q9NP62 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.45■□□□□ 0.06
GCM1Q9NP62 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.45■□□□□ 0.06
GCM1Q9NP62 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.45■□□□□ 0.06
GCM1Q9NP62 AC024563.2-201ENST00000603282 481 ntBASIC15.45■□□□□ 0.06
GCM1Q9NP62 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.45■□□□□ 0.06
GCM1Q9NP62 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GCM1Q9NP62 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
GCM1Q9NP62 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
GCM1Q9NP62 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.45■□□□□ 0.06
GCM1Q9NP62 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GCM1Q9NP62 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.45■□□□□ 0.06
GCM1Q9NP62 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.45■□□□□ 0.06
GCM1Q9NP62 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GCM1Q9NP62 GMCL1P1-201ENST00000463439 1581 ntBASIC15.45■□□□□ 0.06
GCM1Q9NP62 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.45■□□□□ 0.06
GCM1Q9NP62 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
GCM1Q9NP62 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
GCM1Q9NP62 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
GCM1Q9NP62 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GCM1Q9NP62 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms