Protein–RNA interactions for Protein: Q9HCC6

HES4, Transcription factor HES-4, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES4Q9HCC6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HES4Q9HCC6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.32■□□□□ 0.04
HES4Q9HCC6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.32■□□□□ 0.04
HES4Q9HCC6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HES4Q9HCC6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HES4Q9HCC6 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HES4Q9HCC6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
HES4Q9HCC6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HES4Q9HCC6 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HES4Q9HCC6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HES4Q9HCC6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.32■□□□□ 0.04
HES4Q9HCC6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HES4Q9HCC6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HES4Q9HCC6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HES4Q9HCC6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HES4Q9HCC6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HES4Q9HCC6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HES4Q9HCC6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HES4Q9HCC6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HES4Q9HCC6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.31■□□□□ 0.04
HES4Q9HCC6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HES4Q9HCC6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HES4Q9HCC6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.31■□□□□ 0.04
HES4Q9HCC6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HES4Q9HCC6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.31■□□□□ 0.04
HES4Q9HCC6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HES4Q9HCC6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HES4Q9HCC6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HES4Q9HCC6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HES4Q9HCC6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.31■□□□□ 0.04
HES4Q9HCC6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HES4Q9HCC6 YBX1P2-201ENST00000489612 999 ntBASIC15.31■□□□□ 0.04
HES4Q9HCC6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.31■□□□□ 0.04
HES4Q9HCC6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.31■□□□□ 0.04
HES4Q9HCC6 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.31■□□□□ 0.04
HES4Q9HCC6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.31■□□□□ 0.04
HES4Q9HCC6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.31■□□□□ 0.04
HES4Q9HCC6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.31■□□□□ 0.04
HES4Q9HCC6 AC011558.1-201ENST00000623459 338 ntBASIC15.31■□□□□ 0.04
HES4Q9HCC6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HES4Q9HCC6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.31■□□□□ 0.04
HES4Q9HCC6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HES4Q9HCC6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HES4Q9HCC6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HES4Q9HCC6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.31■□□□□ 0.04
HES4Q9HCC6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.31■□□□□ 0.04
HES4Q9HCC6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HES4Q9HCC6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HES4Q9HCC6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HES4Q9HCC6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.31■□□□□ 0.04
HES4Q9HCC6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HES4Q9HCC6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HES4Q9HCC6 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HES4Q9HCC6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HES4Q9HCC6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.31■□□□□ 0.04
HES4Q9HCC6 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
HES4Q9HCC6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
HES4Q9HCC6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HES4Q9HCC6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.3■□□□□ 0.04
HES4Q9HCC6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HES4Q9HCC6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.3■□□□□ 0.04
HES4Q9HCC6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
HES4Q9HCC6 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HES4Q9HCC6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HES4Q9HCC6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
HES4Q9HCC6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HES4Q9HCC6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HES4Q9HCC6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HES4Q9HCC6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.3■□□□□ 0.04
HES4Q9HCC6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HES4Q9HCC6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HES4Q9HCC6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
HES4Q9HCC6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
HES4Q9HCC6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.3■□□□□ 0.04
HES4Q9HCC6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
HES4Q9HCC6 STARP1-201ENST00000397973 869 ntBASIC15.3■□□□□ 0.04
HES4Q9HCC6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HES4Q9HCC6 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
HES4Q9HCC6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HES4Q9HCC6 AC117947.1-201ENST00000427448 529 ntBASIC15.3■□□□□ 0.04
HES4Q9HCC6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.3■□□□□ 0.04
HES4Q9HCC6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
HES4Q9HCC6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HES4Q9HCC6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HES4Q9HCC6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HES4Q9HCC6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.3■□□□□ 0.04
HES4Q9HCC6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HES4Q9HCC6 AC139887.4-201ENST00000607877 719 ntBASIC15.3■□□□□ 0.04
HES4Q9HCC6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HES4Q9HCC6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
HES4Q9HCC6 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
HES4Q9HCC6 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HES4Q9HCC6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HES4Q9HCC6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HES4Q9HCC6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HES4Q9HCC6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HES4Q9HCC6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HES4Q9HCC6 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HES4Q9HCC6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HES4Q9HCC6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms