Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 SAPCD2P3-201ENST00000455031 850 ntBASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 AC096582.2-201ENST00000510860 516 ntBASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 AC079776.4-201ENST00000511039 504 ntBASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 AL591684.3-201ENST00000605187 298 ntBASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 REXO1L6P-202ENST00000619970 1078 ntBASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.97■□□□□ 0.63
ATXN3LQ9H3M9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.96■□□□□ 0.63
ATXN3LQ9H3M9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3LQ9H3M9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3LQ9H3M9 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3LQ9H3M9 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.96■□□□□ 0.63
ATXN3LQ9H3M9 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3LQ9H3M9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3LQ9H3M9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3LQ9H3M9 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3LQ9H3M9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.96■□□□□ 0.63
ATXN3LQ9H3M9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.96■□□□□ 0.63
ATXN3LQ9H3M9 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.96■□□□□ 0.63
ATXN3LQ9H3M9 AC068472.1-201ENST00000474589 881 ntBASIC18.96■□□□□ 0.63
ATXN3LQ9H3M9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3LQ9H3M9 AL662844.1-201ENST00000546340 181 ntBASIC18.96■□□□□ 0.63
ATXN3LQ9H3M9 MIR5100-201ENST00000579544 119 ntBASIC18.96■□□□□ 0.63
ATXN3LQ9H3M9 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.96■□□□□ 0.63
ATXN3LQ9H3M9 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.96■□□□□ 0.63
ATXN3LQ9H3M9 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3LQ9H3M9 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3LQ9H3M9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3LQ9H3M9 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3LQ9H3M9 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.96■□□□□ 0.63
ATXN3LQ9H3M9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3LQ9H3M9 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3LQ9H3M9 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3LQ9H3M9 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3LQ9H3M9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
ATXN3LQ9H3M9 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 AP000347.1-202ENST00000435868 847 ntBASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 AF238378.1-201ENST00000526806 358 ntBASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 SLC25A6P4-201ENST00000586535 553 ntBASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
ATXN3LQ9H3M9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATXN3LQ9H3M9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATXN3LQ9H3M9 LINC00602-201ENST00000629776 2065 ntBASIC18.94■□□□□ 0.62
ATXN3LQ9H3M9 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms