Protein–RNA interactions for Protein: Q9C0K7

STRADB, STE20-related kinase adapter protein beta, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBQ9C0K7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
STRADBQ9C0K7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.16■□□□□ 0.34
STRADBQ9C0K7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.16■□□□□ 0.34
STRADBQ9C0K7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.16■□□□□ 0.34
STRADBQ9C0K7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
STRADBQ9C0K7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
STRADBQ9C0K7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
STRADBQ9C0K7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
STRADBQ9C0K7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
STRADBQ9C0K7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.15■□□□□ 0.34
STRADBQ9C0K7 AC104109.2-201ENST00000602919 1418 ntBASIC17.15■□□□□ 0.34
STRADBQ9C0K7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
STRADBQ9C0K7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
STRADBQ9C0K7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
STRADBQ9C0K7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.15■□□□□ 0.34
STRADBQ9C0K7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
STRADBQ9C0K7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.15■□□□□ 0.34
STRADBQ9C0K7 FAM220CP-201ENST00000395253 831 ntBASIC17.15■□□□□ 0.34
STRADBQ9C0K7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.15■□□□□ 0.34
STRADBQ9C0K7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
STRADBQ9C0K7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.15■□□□□ 0.34
STRADBQ9C0K7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.15■□□□□ 0.34
STRADBQ9C0K7 AC092910.1-201ENST00000482027 1129 ntBASIC17.15■□□□□ 0.34
STRADBQ9C0K7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
STRADBQ9C0K7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
STRADBQ9C0K7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.15■□□□□ 0.34
STRADBQ9C0K7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
STRADBQ9C0K7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.15■□□□□ 0.34
STRADBQ9C0K7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.15■□□□□ 0.34
STRADBQ9C0K7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
STRADBQ9C0K7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
STRADBQ9C0K7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
STRADBQ9C0K7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
STRADBQ9C0K7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
STRADBQ9C0K7 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.15■□□□□ 0.34
STRADBQ9C0K7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
STRADBQ9C0K7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.14■□□□□ 0.33
STRADBQ9C0K7 LINC01126-201ENST00000623515 1646 ntBASIC17.14■□□□□ 0.33
STRADBQ9C0K7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
STRADBQ9C0K7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
STRADBQ9C0K7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
STRADBQ9C0K7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
STRADBQ9C0K7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
STRADBQ9C0K7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
STRADBQ9C0K7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
STRADBQ9C0K7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.14■□□□□ 0.33
STRADBQ9C0K7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
STRADBQ9C0K7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
STRADBQ9C0K7 MED15P5-201ENST00000423150 992 ntBASIC17.14■□□□□ 0.33
STRADBQ9C0K7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.14■□□□□ 0.33
STRADBQ9C0K7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.14■□□□□ 0.33
STRADBQ9C0K7 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.14■□□□□ 0.33
STRADBQ9C0K7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
STRADBQ9C0K7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.14■□□□□ 0.33
STRADBQ9C0K7 FAM197Y3-203ENST00000618346 717 ntBASIC17.14■□□□□ 0.33
STRADBQ9C0K7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
STRADBQ9C0K7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
STRADBQ9C0K7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
STRADBQ9C0K7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
STRADBQ9C0K7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
STRADBQ9C0K7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.14■□□□□ 0.33
STRADBQ9C0K7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.14■□□□□ 0.33
STRADBQ9C0K7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
STRADBQ9C0K7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
STRADBQ9C0K7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
STRADBQ9C0K7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
STRADBQ9C0K7 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.13■□□□□ 0.33
STRADBQ9C0K7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
STRADBQ9C0K7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
STRADBQ9C0K7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.13■□□□□ 0.33
STRADBQ9C0K7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
STRADBQ9C0K7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
STRADBQ9C0K7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.13■□□□□ 0.33
STRADBQ9C0K7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.13■□□□□ 0.33
STRADBQ9C0K7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
STRADBQ9C0K7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
STRADBQ9C0K7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.13■□□□□ 0.33
STRADBQ9C0K7 IGHV3-22-201ENST00000520721 359 ntBASIC17.13■□□□□ 0.33
STRADBQ9C0K7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.13■□□□□ 0.33
STRADBQ9C0K7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.13■□□□□ 0.33
STRADBQ9C0K7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
STRADBQ9C0K7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
STRADBQ9C0K7 AFG3L1P-217ENST00000557444 2447 ntBASIC17.13■□□□□ 0.33
STRADBQ9C0K7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
STRADBQ9C0K7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
STRADBQ9C0K7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.13■□□□□ 0.33
STRADBQ9C0K7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.13■□□□□ 0.33
STRADBQ9C0K7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
STRADBQ9C0K7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
STRADBQ9C0K7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
STRADBQ9C0K7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
STRADBQ9C0K7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
STRADBQ9C0K7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
STRADBQ9C0K7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
STRADBQ9C0K7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
STRADBQ9C0K7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
STRADBQ9C0K7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
STRADBQ9C0K7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
STRADBQ9C0K7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
STRADBQ9C0K7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms