Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.25■□□□□ 0.83
CCSER1Q9C0I3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.25■□□□□ 0.83
CCSER1Q9C0I3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCSER1Q9C0I3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCSER1Q9C0I3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.25■□□□□ 0.83
CCSER1Q9C0I3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCSER1Q9C0I3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCSER1Q9C0I3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCSER1Q9C0I3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCSER1Q9C0I3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 AP003733.1-201ENST00000491725 852 ntBASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 VENTXP5-201ENST00000523979 775 ntBASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 AC083849.1-201ENST00000615227 514 ntBASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 LINC01311-201ENST00000565162 1445 ntBASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCSER1Q9C0I3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCSER1Q9C0I3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
CCSER1Q9C0I3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CCSER1Q9C0I3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CCSER1Q9C0I3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.23■□□□□ 0.83
CCSER1Q9C0I3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CCSER1Q9C0I3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCSER1Q9C0I3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCSER1Q9C0I3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCSER1Q9C0I3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.23■□□□□ 0.83
CCSER1Q9C0I3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCSER1Q9C0I3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.23■□□□□ 0.83
CCSER1Q9C0I3 ZNF444P1-201ENST00000559497 298 ntBASIC20.23■□□□□ 0.83
CCSER1Q9C0I3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.23■□□□□ 0.83
CCSER1Q9C0I3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CCSER1Q9C0I3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCSER1Q9C0I3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.23■□□□□ 0.83
CCSER1Q9C0I3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCSER1Q9C0I3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.23■□□□□ 0.83
CCSER1Q9C0I3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCSER1Q9C0I3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCSER1Q9C0I3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.22■□□□□ 0.83
CCSER1Q9C0I3 PCDHB18P-201ENST00000524813 2368 ntBASIC20.22■□□□□ 0.83
CCSER1Q9C0I3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCSER1Q9C0I3 AC005332.8-201ENST00000622750 2735 ntBASIC20.22■□□□□ 0.83
CCSER1Q9C0I3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCSER1Q9C0I3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.22■□□□□ 0.83
CCSER1Q9C0I3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCSER1Q9C0I3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCSER1Q9C0I3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCSER1Q9C0I3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCSER1Q9C0I3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.22■□□□□ 0.83
CCSER1Q9C0I3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.22■□□□□ 0.83
CCSER1Q9C0I3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.22■□□□□ 0.83
CCSER1Q9C0I3 AC009154.2-201ENST00000621177 724 ntBASIC20.22■□□□□ 0.83
CCSER1Q9C0I3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.22■□□□□ 0.83
CCSER1Q9C0I3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCSER1Q9C0I3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCSER1Q9C0I3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.22■□□□□ 0.83
CCSER1Q9C0I3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCSER1Q9C0I3 AC012317.2-201ENST00000623305 2251 ntBASIC20.22■□□□□ 0.83
CCSER1Q9C0I3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCSER1Q9C0I3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms