Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH11YQ9BZA8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH11YQ9BZA8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH11YQ9BZA8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH11YQ9BZA8 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH11YQ9BZA8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH11YQ9BZA8 HNRNPA1P28-201ENST00000424481 961 ntBASIC23.35■■□□□ 1.33
PCDH11YQ9BZA8 PRYP5-201ENST00000451909 266 ntBASIC23.35■■□□□ 1.33
PCDH11YQ9BZA8 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH11YQ9BZA8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC23.35■■□□□ 1.33
PCDH11YQ9BZA8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC23.35■■□□□ 1.33
PCDH11YQ9BZA8 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
PCDH11YQ9BZA8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDH11YQ9BZA8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH11YQ9BZA8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH11YQ9BZA8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDH11YQ9BZA8 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH11YQ9BZA8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH11YQ9BZA8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDH11YQ9BZA8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH11YQ9BZA8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC23.35■■□□□ 1.33
PCDH11YQ9BZA8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 COA5-202ENST00000409997 557 ntTSL 4 BASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 AC108751.1-201ENST00000490852 363 ntBASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 AC136632.2-201ENST00000512891 861 ntBASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 AC134684.3-201ENST00000641758 218 ntBASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 AC079781.4-201ENST00000641908 219 ntBASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 AC004817.3-201ENST00000602957 2129 ntBASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH11YQ9BZA8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH11YQ9BZA8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH11YQ9BZA8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
PCDH11YQ9BZA8 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH11YQ9BZA8 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH11YQ9BZA8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC23.33■■□□□ 1.33
PCDH11YQ9BZA8 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC23.33■■□□□ 1.33
PCDH11YQ9BZA8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC23.33■■□□□ 1.33
PCDH11YQ9BZA8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC23.33■■□□□ 1.33
PCDH11YQ9BZA8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
PCDH11YQ9BZA8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH11YQ9BZA8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH11YQ9BZA8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH11YQ9BZA8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH11YQ9BZA8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC23.33■■□□□ 1.33
PCDH11YQ9BZA8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH11YQ9BZA8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC23.33■■□□□ 1.33
PCDH11YQ9BZA8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH11YQ9BZA8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH11YQ9BZA8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PCDH11YQ9BZA8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PCDH11YQ9BZA8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
PCDH11YQ9BZA8 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
PCDH11YQ9BZA8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PCDH11YQ9BZA8 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
PCDH11YQ9BZA8 AC023274.1-201ENST00000418278 595 ntBASIC23.33■■□□□ 1.32
PCDH11YQ9BZA8 RPS8P6-201ENST00000426177 609 ntBASIC23.33■■□□□ 1.32
PCDH11YQ9BZA8 HMGN1P19-201ENST00000436976 333 ntBASIC23.33■■□□□ 1.32
PCDH11YQ9BZA8 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC23.33■■□□□ 1.32
PCDH11YQ9BZA8 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC23.33■■□□□ 1.32
PCDH11YQ9BZA8 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC23.33■■□□□ 1.32
PCDH11YQ9BZA8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC23.33■■□□□ 1.32
PCDH11YQ9BZA8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH11YQ9BZA8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC23.32■■□□□ 1.32
PCDH11YQ9BZA8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH11YQ9BZA8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH11YQ9BZA8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC23.32■■□□□ 1.32
PCDH11YQ9BZA8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH11YQ9BZA8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH11YQ9BZA8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23.32■■□□□ 1.32
PCDH11YQ9BZA8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH11YQ9BZA8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH11YQ9BZA8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH11YQ9BZA8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
PCDH11YQ9BZA8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH11YQ9BZA8 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC23.32■■□□□ 1.32
PCDH11YQ9BZA8 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC23.32■■□□□ 1.32
PCDH11YQ9BZA8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms