Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 NIFKP9-201ENST00000419265 221 ntBASIC16.63■□□□□ 0.25
COPS4Q9BT78 Z85996.1-201ENST00000494644 937 ntBASIC16.63■□□□□ 0.25
COPS4Q9BT78 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS4Q9BT78 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.63■□□□□ 0.25
COPS4Q9BT78 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
COPS4Q9BT78 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.63■□□□□ 0.25
COPS4Q9BT78 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.63■□□□□ 0.25
COPS4Q9BT78 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.63■□□□□ 0.25
COPS4Q9BT78 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.63■□□□□ 0.25
COPS4Q9BT78 MIR4651-201ENST00000582622 73 ntBASIC16.63■□□□□ 0.25
COPS4Q9BT78 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.63■□□□□ 0.25
COPS4Q9BT78 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COPS4Q9BT78 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COPS4Q9BT78 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.63■□□□□ 0.25
COPS4Q9BT78 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.63■□□□□ 0.25
COPS4Q9BT78 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS4Q9BT78 HTR7P1-201ENST00000538670 1336 ntBASIC16.63■□□□□ 0.25
COPS4Q9BT78 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS4Q9BT78 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS4Q9BT78 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS4Q9BT78 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS4Q9BT78 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COPS4Q9BT78 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS4Q9BT78 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.63■□□□□ 0.25
COPS4Q9BT78 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COPS4Q9BT78 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.62■□□□□ 0.25
COPS4Q9BT78 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
COPS4Q9BT78 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
COPS4Q9BT78 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS4Q9BT78 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COPS4Q9BT78 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS4Q9BT78 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS4Q9BT78 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COPS4Q9BT78 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS4Q9BT78 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COPS4Q9BT78 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
COPS4Q9BT78 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS4Q9BT78 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS4Q9BT78 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS4Q9BT78 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS4Q9BT78 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.62■□□□□ 0.25
COPS4Q9BT78 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
COPS4Q9BT78 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.62■□□□□ 0.25
COPS4Q9BT78 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS4Q9BT78 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
COPS4Q9BT78 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS4Q9BT78 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COPS4Q9BT78 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
COPS4Q9BT78 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COPS4Q9BT78 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COPS4Q9BT78 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.62■□□□□ 0.25
COPS4Q9BT78 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.62■□□□□ 0.25
COPS4Q9BT78 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.62■□□□□ 0.25
COPS4Q9BT78 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.62■□□□□ 0.25
COPS4Q9BT78 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COPS4Q9BT78 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS4Q9BT78 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS4Q9BT78 GMCL1P1-201ENST00000463439 1581 ntBASIC16.62■□□□□ 0.25
COPS4Q9BT78 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS4Q9BT78 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COPS4Q9BT78 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.62■□□□□ 0.25
COPS4Q9BT78 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS4Q9BT78 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COPS4Q9BT78 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.62■□□□□ 0.25
COPS4Q9BT78 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS4Q9BT78 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.62■□□□□ 0.25
COPS4Q9BT78 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS4Q9BT78 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS4Q9BT78 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS4Q9BT78 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS4Q9BT78 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS4Q9BT78 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COPS4Q9BT78 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS4Q9BT78 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS4Q9BT78 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS4Q9BT78 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS4Q9BT78 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
COPS4Q9BT78 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.61■□□□□ 0.25
COPS4Q9BT78 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.61■□□□□ 0.25
COPS4Q9BT78 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS4Q9BT78 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS4Q9BT78 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COPS4Q9BT78 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.61■□□□□ 0.25
COPS4Q9BT78 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
COPS4Q9BT78 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COPS4Q9BT78 AL353807.1-201ENST00000427475 662 ntBASIC16.61■□□□□ 0.25
COPS4Q9BT78 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.61■□□□□ 0.25
COPS4Q9BT78 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.61■□□□□ 0.25
COPS4Q9BT78 AC008894.3-201ENST00000624324 3103 ntBASIC16.61■□□□□ 0.25
COPS4Q9BT78 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS4Q9BT78 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS4Q9BT78 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS4Q9BT78 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS4Q9BT78 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COPS4Q9BT78 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COPS4Q9BT78 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.61■□□□□ 0.25
COPS4Q9BT78 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COPS4Q9BT78 PHGDH-209ENST00000641074 1780 ntBASIC16.61■□□□□ 0.25
COPS4Q9BT78 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
COPS4Q9BT78 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms