Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA3CQ99985 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA3CQ99985 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA3CQ99985 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA3CQ99985 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SEMA3CQ99985 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
SEMA3CQ99985 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.35■□□□□ 0.53
SEMA3CQ99985 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.35■□□□□ 0.53
SEMA3CQ99985 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA3CQ99985 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SEMA3CQ99985 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA3CQ99985 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA3CQ99985 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA3CQ99985 Z83836.1-201ENST00000624605 1642 ntBASIC18.35■□□□□ 0.53
SEMA3CQ99985 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA3CQ99985 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
SEMA3CQ99985 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA3CQ99985 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA3CQ99985 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA3CQ99985 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.35■□□□□ 0.53
SEMA3CQ99985 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA3CQ99985 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.35■□□□□ 0.53
SEMA3CQ99985 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.35■□□□□ 0.53
SEMA3CQ99985 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.35■□□□□ 0.53
SEMA3CQ99985 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.35■□□□□ 0.53
SEMA3CQ99985 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA3CQ99985 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA3CQ99985 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA3CQ99985 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SEMA3CQ99985 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SEMA3CQ99985 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA3CQ99985 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.35■□□□□ 0.53
SEMA3CQ99985 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA3CQ99985 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SEMA3CQ99985 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SEMA3CQ99985 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.35■□□□□ 0.53
SEMA3CQ99985 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEMA3CQ99985 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEMA3CQ99985 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SEMA3CQ99985 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEMA3CQ99985 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEMA3CQ99985 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.34■□□□□ 0.53
SEMA3CQ99985 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEMA3CQ99985 AL353692.3-201ENST00000407031 1396 ntBASIC18.34■□□□□ 0.53
SEMA3CQ99985 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.34■□□□□ 0.53
SEMA3CQ99985 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEMA3CQ99985 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SEMA3CQ99985 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SEMA3CQ99985 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SEMA3CQ99985 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEMA3CQ99985 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEMA3CQ99985 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEMA3CQ99985 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEMA3CQ99985 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.34■□□□□ 0.53
SEMA3CQ99985 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.34■□□□□ 0.53
SEMA3CQ99985 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.34■□□□□ 0.53
SEMA3CQ99985 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SEMA3CQ99985 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.34■□□□□ 0.53
SEMA3CQ99985 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.34■□□□□ 0.53
SEMA3CQ99985 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEMA3CQ99985 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.34■□□□□ 0.53
SEMA3CQ99985 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.34■□□□□ 0.53
SEMA3CQ99985 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.34■□□□□ 0.53
SEMA3CQ99985 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
SEMA3CQ99985 AL390719.2-201ENST00000606993 987 ntBASIC18.34■□□□□ 0.53
SEMA3CQ99985 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SEMA3CQ99985 AC138028.4-201ENST00000564984 1845 ntBASIC18.34■□□□□ 0.53
SEMA3CQ99985 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
SEMA3CQ99985 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
SEMA3CQ99985 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEMA3CQ99985 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.34■□□□□ 0.53
SEMA3CQ99985 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.34■□□□□ 0.53
SEMA3CQ99985 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SEMA3CQ99985 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEMA3CQ99985 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
SEMA3CQ99985 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SEMA3CQ99985 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SEMA3CQ99985 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SEMA3CQ99985 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SEMA3CQ99985 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SEMA3CQ99985 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
SEMA3CQ99985 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SEMA3CQ99985 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
SEMA3CQ99985 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SEMA3CQ99985 AP000997.3-201ENST00000623333 2250 ntBASIC18.33■□□□□ 0.53
SEMA3CQ99985 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.33■□□□□ 0.53
SEMA3CQ99985 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SEMA3CQ99985 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SEMA3CQ99985 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SEMA3CQ99985 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SEMA3CQ99985 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SEMA3CQ99985 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SEMA3CQ99985 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SEMA3CQ99985 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.33■□□□□ 0.52
SEMA3CQ99985 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SEMA3CQ99985 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.33■□□□□ 0.52
SEMA3CQ99985 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.33■□□□□ 0.52
SEMA3CQ99985 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.33■□□□□ 0.52
SEMA3CQ99985 KRT18P56-201ENST00000507275 550 ntBASIC18.33■□□□□ 0.52
SEMA3CQ99985 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms