Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.63■□□□□ 0.89
PTPN18Q99952 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.63■□□□□ 0.89
PTPN18Q99952 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN18Q99952 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN18Q99952 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN18Q99952 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN18Q99952 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC20.63■□□□□ 0.89
PTPN18Q99952 ELK2BP-201ENST00000415014 1224 ntBASIC20.63■□□□□ 0.89
PTPN18Q99952 AC096633.1-201ENST00000422446 749 ntBASIC20.63■□□□□ 0.89
PTPN18Q99952 LHX6-205ENST00000464484 666 ntTSL 2 BASIC20.63■□□□□ 0.89
PTPN18Q99952 AC122714.2-201ENST00000502787 707 ntBASIC20.63■□□□□ 0.89
PTPN18Q99952 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN18Q99952 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN18Q99952 SPCS2P1-201ENST00000561636 679 ntBASIC20.63■□□□□ 0.89
PTPN18Q99952 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.63■□□□□ 0.89
PTPN18Q99952 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC20.63■□□□□ 0.89
PTPN18Q99952 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN18Q99952 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN18Q99952 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN18Q99952 AC132938.6-201ENST00000623828 1655 ntBASIC20.63■□□□□ 0.89
PTPN18Q99952 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.63■□□□□ 0.89
PTPN18Q99952 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PTPN18Q99952 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN18Q99952 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PTPN18Q99952 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN18Q99952 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN18Q99952 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN18Q99952 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.62■□□□□ 0.89
PTPN18Q99952 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PTPN18Q99952 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN18Q99952 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN18Q99952 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.62■□□□□ 0.89
PTPN18Q99952 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.62■□□□□ 0.89
PTPN18Q99952 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PTPN18Q99952 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN18Q99952 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN18Q99952 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.62■□□□□ 0.89
PTPN18Q99952 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.62■□□□□ 0.89
PTPN18Q99952 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN18Q99952 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.62■□□□□ 0.89
PTPN18Q99952 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.62■□□□□ 0.89
PTPN18Q99952 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PTPN18Q99952 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.62■□□□□ 0.89
PTPN18Q99952 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN18Q99952 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN18Q99952 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.62■□□□□ 0.89
PTPN18Q99952 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PTPN18Q99952 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PTPN18Q99952 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN18Q99952 AC005082.1-201ENST00000413042 2259 ntBASIC20.62■□□□□ 0.89
PTPN18Q99952 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN18Q99952 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN18Q99952 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.62■□□□□ 0.89
PTPN18Q99952 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
PTPN18Q99952 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.61■□□□□ 0.89
PTPN18Q99952 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN18Q99952 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN18Q99952 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN18Q99952 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.61■□□□□ 0.89
PTPN18Q99952 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN18Q99952 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.61■□□□□ 0.89
PTPN18Q99952 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN18Q99952 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.61■□□□□ 0.89
PTPN18Q99952 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN18Q99952 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN18Q99952 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN18Q99952 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN18Q99952 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.61■□□□□ 0.89
PTPN18Q99952 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PTPN18Q99952 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.61■□□□□ 0.89
PTPN18Q99952 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.61■□□□□ 0.89
PTPN18Q99952 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.61■□□□□ 0.89
PTPN18Q99952 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.61■□□□□ 0.89
PTPN18Q99952 AC093028.1-201ENST00000622998 982 ntBASIC20.61■□□□□ 0.89
PTPN18Q99952 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN18Q99952 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN18Q99952 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.61■□□□□ 0.89
PTPN18Q99952 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN18Q99952 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN18Q99952 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN18Q99952 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN18Q99952 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN18Q99952 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
PTPN18Q99952 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.61■□□□□ 0.89
PTPN18Q99952 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.61■□□□□ 0.89
PTPN18Q99952 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN18Q99952 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
PTPN18Q99952 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
PTPN18Q99952 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
PTPN18Q99952 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN18Q99952 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.6■□□□□ 0.89
PTPN18Q99952 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.6■□□□□ 0.89
PTPN18Q99952 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.6■□□□□ 0.89
PTPN18Q99952 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN18Q99952 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN18Q99952 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.6■□□□□ 0.89
PTPN18Q99952 AL139400.1-201ENST00000366220 510 ntBASIC20.6■□□□□ 0.89
PTPN18Q99952 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.6■□□□□ 0.89
PTPN18Q99952 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN18Q99952 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms