Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SLC38A3Q99624 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC38A3Q99624 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC38A3Q99624 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC38A3Q99624 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC38A3Q99624 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC38A3Q99624 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC38A3Q99624 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC38A3Q99624 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC38A3Q99624 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC38A3Q99624 KRT8P10-201ENST00000450021 1447 ntBASIC17.51■□□□□ 0.39
SLC38A3Q99624 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.51■□□□□ 0.39
SLC38A3Q99624 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC38A3Q99624 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC38A3Q99624 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC38A3Q99624 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC38A3Q99624 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC38A3Q99624 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SLC38A3Q99624 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC38A3Q99624 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC38A3Q99624 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC38A3Q99624 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC38A3Q99624 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SLC38A3Q99624 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC38A3Q99624 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC38A3Q99624 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SLC38A3Q99624 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC38A3Q99624 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC38A3Q99624 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC38A3Q99624 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC38A3Q99624 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SLC38A3Q99624 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC38A3Q99624 AC126763.1-201ENST00000552015 2118 ntBASIC17.5■□□□□ 0.39
SLC38A3Q99624 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC38A3Q99624 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC38A3Q99624 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SLC38A3Q99624 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC38A3Q99624 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.5■□□□□ 0.39
SLC38A3Q99624 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC38A3Q99624 MTCL1P1-201ENST00000446207 792 ntBASIC17.5■□□□□ 0.39
SLC38A3Q99624 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.5■□□□□ 0.39
SLC38A3Q99624 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC38A3Q99624 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SLC38A3Q99624 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.5■□□□□ 0.39
SLC38A3Q99624 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC38A3Q99624 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SLC38A3Q99624 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC38A3Q99624 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC38A3Q99624 AL591684.3-201ENST00000605187 298 ntBASIC17.5■□□□□ 0.39
SLC38A3Q99624 AL031008.1-201ENST00000619963 541 ntBASIC17.5■□□□□ 0.39
SLC38A3Q99624 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC38A3Q99624 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC38A3Q99624 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC38A3Q99624 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC38A3Q99624 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC38A3Q99624 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC38A3Q99624 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC38A3Q99624 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC38A3Q99624 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC38A3Q99624 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC38A3Q99624 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC38A3Q99624 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC38A3Q99624 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC38A3Q99624 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC38A3Q99624 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC38A3Q99624 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC38A3Q99624 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC38A3Q99624 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC38A3Q99624 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC38A3Q99624 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC38A3Q99624 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
SLC38A3Q99624 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC38A3Q99624 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC38A3Q99624 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
SLC38A3Q99624 KRT18P65-201ENST00000439811 1286 ntBASIC17.49■□□□□ 0.39
SLC38A3Q99624 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC38A3Q99624 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.49■□□□□ 0.39
SLC38A3Q99624 BNIP3P18-201ENST00000593976 575 ntBASIC17.49■□□□□ 0.39
SLC38A3Q99624 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SLC38A3Q99624 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC38A3Q99624 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC38A3Q99624 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC38A3Q99624 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC38A3Q99624 AC090340.1-201ENST00000620778 4980 ntBASIC17.49■□□□□ 0.39
SLC38A3Q99624 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC38A3Q99624 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SLC38A3Q99624 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC38A3Q99624 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC38A3Q99624 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC38A3Q99624 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC38A3Q99624 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC38A3Q99624 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SLC38A3Q99624 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SLC38A3Q99624 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC38A3Q99624 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC38A3Q99624 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC38A3Q99624 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC38A3Q99624 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC38A3Q99624 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC38A3Q99624 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms