Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 MKNK2P1-201ENST00000437526 628 ntBASIC18.74■□□□□ 0.59
CDCA3Q99618 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDCA3Q99618 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.74■□□□□ 0.59
CDCA3Q99618 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.74■□□□□ 0.59
CDCA3Q99618 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.74■□□□□ 0.59
CDCA3Q99618 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.74■□□□□ 0.59
CDCA3Q99618 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CDCA3Q99618 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.74■□□□□ 0.59
CDCA3Q99618 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.74■□□□□ 0.59
CDCA3Q99618 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.74■□□□□ 0.59
CDCA3Q99618 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CDCA3Q99618 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDCA3Q99618 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.74■□□□□ 0.59
CDCA3Q99618 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CDCA3Q99618 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDCA3Q99618 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDCA3Q99618 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDCA3Q99618 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDCA3Q99618 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDCA3Q99618 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDCA3Q99618 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CDCA3Q99618 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDCA3Q99618 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CDCA3Q99618 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDCA3Q99618 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDCA3Q99618 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDCA3Q99618 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDCA3Q99618 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CDCA3Q99618 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CDCA3Q99618 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CDCA3Q99618 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CDCA3Q99618 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CDCA3Q99618 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.73■□□□□ 0.59
CDCA3Q99618 AL020989.1-201ENST00000422979 469 ntBASIC18.73■□□□□ 0.59
CDCA3Q99618 PRSS29P-201ENST00000440800 595 ntBASIC18.73■□□□□ 0.59
CDCA3Q99618 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.73■□□□□ 0.59
CDCA3Q99618 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CDCA3Q99618 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDCA3Q99618 AC073592.5-201ENST00000624854 528 ntBASIC18.73■□□□□ 0.59
CDCA3Q99618 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDCA3Q99618 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CDCA3Q99618 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CDCA3Q99618 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDCA3Q99618 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDCA3Q99618 GMCL1P1-201ENST00000463439 1581 ntBASIC18.72■□□□□ 0.59
CDCA3Q99618 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDCA3Q99618 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDCA3Q99618 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDCA3Q99618 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.72■□□□□ 0.59
CDCA3Q99618 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDCA3Q99618 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDCA3Q99618 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDCA3Q99618 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CDCA3Q99618 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDCA3Q99618 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.72■□□□□ 0.59
CDCA3Q99618 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDCA3Q99618 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDCA3Q99618 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDCA3Q99618 VN2R19P-201ENST00000442399 1052 ntBASIC18.72■□□□□ 0.59
CDCA3Q99618 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.72■□□□□ 0.59
CDCA3Q99618 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.72■□□□□ 0.59
CDCA3Q99618 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
CDCA3Q99618 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.72■□□□□ 0.59
CDCA3Q99618 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.72■□□□□ 0.59
CDCA3Q99618 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDCA3Q99618 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDCA3Q99618 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
CDCA3Q99618 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDCA3Q99618 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDCA3Q99618 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.72■□□□□ 0.59
CDCA3Q99618 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDCA3Q99618 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.71■□□□□ 0.59
CDCA3Q99618 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDCA3Q99618 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CDCA3Q99618 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.71■□□□□ 0.59
CDCA3Q99618 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.71■□□□□ 0.59
CDCA3Q99618 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDCA3Q99618 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.71■□□□□ 0.59
CDCA3Q99618 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDCA3Q99618 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDCA3Q99618 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.71■□□□□ 0.59
CDCA3Q99618 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDCA3Q99618 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CDCA3Q99618 CNN2P11-201ENST00000429351 262 ntBASIC18.71■□□□□ 0.59
CDCA3Q99618 ALG1L5P-201ENST00000482043 771 ntBASIC18.71■□□□□ 0.59
CDCA3Q99618 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDCA3Q99618 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDCA3Q99618 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.71■□□□□ 0.59
CDCA3Q99618 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDCA3Q99618 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDCA3Q99618 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.71■□□□□ 0.59
CDCA3Q99618 AC010460.3-201ENST00000511359 1579 ntBASIC18.71■□□□□ 0.59
CDCA3Q99618 AC004817.3-201ENST00000602957 2129 ntBASIC18.71■□□□□ 0.59
CDCA3Q99618 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDCA3Q99618 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDCA3Q99618 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDCA3Q99618 AL499627.1-201ENST00000569373 2188 ntBASIC18.71■□□□□ 0.59
CDCA3Q99618 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.71■□□□□ 0.59
CDCA3Q99618 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CDCA3Q99618 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms